Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03430 ATGGCCAGTACCAGCAATAGCAACTCTTCATCTCTGGTCACTTTTCCAAGGAGAAATTATTATGACGTGTTTGTGAGCTTTAGAGGCGAAGACACACGCTGCAACTTCGCTGATCATCTTTTTGCTGCATTTCAGAGAAAAGGTATTTTTGCATTTAGGGATGACACTAAGCTGAAGAAAGGTGAATCCATAGCACCTGAGCTATTTCGAGCAATCCAAGACTCTCAGATTTTTGTTGTGATATTTTCTAAGAACTATGCTTCCTCAACTTGGTGCTTGAGAGAATTGGAACACATCCTTCTTCAATGCGGTCAACTACCGGAAAAACGTGTTCTGCCTGTTTTCTATGATGTTGATCCTTCTGAAGTGAGACATCAAAAAGGAACTTATGGCGAAGCCTTAGCTAAACATGAGCAAAGATTCCAACAAGACCCTGAGAAGGTGCGAAGATGGACGGAAGCTCTATCACAAGTCACAGATCTCTCTGGATGGGATGTGTGTCATAAGCCACAACATGCAGAGATTGAAAAGATTGTTGAAGAGATTATAAGTATATTAGGTTGCAAGTTTTCAAGTCTTCCAAAAGATTTAGTAGGGATGCACTCTCCTATACACGAATTAGAAAAGCATTTACTTTTGGACTCACTTGATGATGTCCGTGTTGTAGGAATTTGTGGGATGGGTGGAATAGGGAAGACAACTCTCGCTACTACTTTATACAACAAAATCTCTCATCAATTTCATCTCTGCTGCATTATTGATGACTTGAGCAAAAGGTATAGGCAAGATGGTCCAATCAGTGCACAAAAGCAAATTTTACTTCAAATTGTAGGCGAAGAACAGCTTCAAACATGCACTTCATACAACACATATAACTTGATACGAAGTAGGCTACATCGTGTAAAGGCCCTTATAATTCTCGACAATGTTGATCAAGTTGAACAACTAGAGAAACTATCCGTGAGCCGTGAATGGTTAGGTGAGGGAAGTAGAGTCATTGTAATTTCTAGAGATGAGCATATCTTAAAAGAGTATGGAGTGGATGTTGTTTACAAAGTTCCACTCTTGAATGAAAATAACTCTCTTCAATTATTCAGTCGAAAAGCTTTCAAACTTGATCATATTGTGAATAGTTATGATAAGTTGGCATTTGACATACTACATTATGCAAATGGCTTGCCACTGGCAATTAAAGTATTGGGTTCATTTTTGTTTGGTCGTAGTATCTCTGAATGGAAAAGTGCATTGGCAAGATTAAGAAAAAGTCCAAACAAAGATATCATGGATGTGTTGCGATTAAGTTTTGATGGACTAGAAAAAACGGAAAAGGAAATATTTCTTCATATTGCTTGTTTTTTCCACTCTCGCAATGAGAAATATGTTACAAATGTTCTTAATTGTTGTGGATTTCATGTTGATATTGGATTAAGAGTTCTAATTGATAAATCACTTATAAGCCTTTCAGGAAAAAATTGTATTGAAATGCATAGTTTGTTAGAAGAGTTGGGCAAAAAAATTGTTCAGGAAAAATCGAGTAAGTGGAGCAGGGTGTGGCGCGAGAAACAGTTCTACAATATTAAATTAGAGAATATGGAAAAGAAGGTTGAAGCCATTTGTTCGCCAGGAACATATCATCTAATGGCCAACATGTTGTCAAAAATGATCCATCTAAGATTGCTCATACTGAATGGAGTTAATTCTACAGAAAACCTTACTAGTCTCACTAATGAGTTAAGATATGTGGAGTGGGATAAATATCCTTTCAAGTATTTGCCATCAATTTTTCAACCCAATCAACTTGTTGAATTGATCTTGAGGTACAGCAACATCAAACAACTATGTGAAGACAATAAGTATTTTTCCAAGTTGAGAAGTTTGGATTTGAGCTACTCAAAAAATCTAATAAAGATGCCGGATTTTAGAGATATTCCACATCTTGAGCAACTAAGTTTTGAAGGATGTGTAAAACTGGTGAAGATGGATCCATCTATTGGTGTTCTAAAAAAGGTTGTTTTCTTGAATTTGAAAGATTGCAAAAATCTAGTAAGCATATCAAACAACATATTCAGTCTCAACTCTCTTGAATATGTTAATCTTTCTGGGTGTCCCAAAGTGTTTAAGAATCAAGGGCTTTTCAATATAAGTGGAAATGCATCACATTCCCAATCAACAACGTCCTCCATCTTGAAATGGACAGCATTTCGTTACCGTTCCTTGTACTCCCGCGCACACAAAGATTTAGCTAGTTGTTTGTTGCCCTTCTTGTCTAGCTTCTCTAACTTGCTTGAGCTTGATATTAGTTTTTGTGGTCTAAGCCAACTCCCTGATGCAATTGGATGTTTACGTTGGCTAGAAGAATTAGAATTAGGGGGAAACAATTTTGTAACGTTGCCTAGTCTGAAGGAACTTTGCAGACTTGCATATTTAAACTTGCAGCATTGCAAACTCTTGGAATATTTGCCTGAACTTCCTTTTCCTACTGCTATCGATCAGGAATTTCGAAAGAATAAATACATGAACAAAAAAGGATTGGTTATTTTCAATTGTCCTAAATTGAATGAGAGGGAACTTGGCAGTACTATCAATTTTTCATGGATGAAACAGTTTATTCAGGCAAACCAAGTACTCACTTCAATCTATAATGAGATTGATTTTGTAATTCCAGGAAGTGAAATACCAAGTTGGTGCAACAATCAGAGTGAGGGTCGTTCAATAAGAATAGATCTATCTCCTATTATGTCTGGCAATGACAATAATTGCAGCGGCATTGCTTGTTGTGCAATATTTTCTTTCTCAACTGTTGTCCCAACTATGACAAGTTATGCACAATGTTCTGACATGGAACTAGTTCTTTCTAACAGTGTATTTAACGGGAAGACTATTCGCATGATTCCAATAATTCTTGAAAGAGATCTTATTGAGATCGAATCAGATCACATGTGCCTAATCTATTTCCCTCTGAAAACATTCTTTTATTATCTGAAGATTATGGACAAAACTCTCGGCCATCAAGATCAATTTAAGGTGTATTTTAGAATTGGGAATCACAAATGTATGGGTTGGAAGGTTCAGAAGTGTGGGTATCATTGGGTATGTAAACAAGAACATGCATCGCTGCCGAAACTACTTAGCTCAGAAGTGCAAGTTTTTGGCAATTGA 3159 0.3672 MASTSNSNSSSLVTFPRRNYYDVFVSFRGEDTRCNFADHLFAAFQRKGIFAFRDDTKLKKGESIAPELFRAIQDSQIFVVIFSKNYASSTWCLRELEHILLQCGQLPEKRVLPVFYDVDPSEVRHQKGTYGEALAKHEQRFQQDPEKVRRWTEALSQVTDLSGWDVCHKPQHAEIEKIVEEIISILGCKFSSLPKDLVGMHSPIHELEKHLLLDSLDDVRVVGICGMGGIGKTTLATTLYNKISHQFHLCCIIDDLSKRYRQDGPISAQKQILLQIVGEEQLQTCTSYNTYNLIRSRLHRVKALIILDNVDQVEQLEKLSVSREWLGEGSRVIVISRDEHILKEYGVDVVYKVPLLNENNSLQLFSRKAFKLDHIVNSYDKLAFDILHYANGLPLAIKVLGSFLFGRSISEWKSALARLRKSPNKDIMDVLRLSFDGLEKTEKEIFLHIACFFHSRNEKYVTNVLNCCGFHVDIGLRVLIDKSLISLSGKNCIEMHSLLEELGKKIVQEKSSKWSRVWREKQFYNIKLENMEKKVEAICSPGTYHLMANMLSKMIHLRLLILNGVNSTENLTSLTNELRYVEWDKYPFKYLPSIFQPNQLVELILRYSNIKQLCEDNKYFSKLRSLDLSYSKNLIKMPDFRDIPHLEQLSFEGCVKLVKMDPSIGVLKKVVFLNLKDCKNLVSISNNIFSLNSLEYVNLSGCPKVFKNQGLFNISGNASHSQSTTSSILKWTAFRYRSLYSRAHKDLASCLLPFLSSFSNLLELDISFCGLSQLPDAIGCLRWLEELELGGNNFVTLPSLKELCRLAYLNLQHCKLLEYLPELPFPTAIDQEFRKNKYMNKKGLVIFNCPKLNERELGSTINFSWMKQFIQANQVLTSIYNEIDFVIPGSEIPSWCNNQSEGRSIRIDLSPIMSGNDNNCSGIACCAIFSFSTVVPTMTSYAQCSDMELVLSNSVFNGKTIRMIPIILERDLIEIESDHMCLIYFPLKTFFYYLKIMDKTLGHQDQFKVYFRIGNHKCMGWKVQKCGYHWVCKQEHASLPKLLSSEVQVFGN 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03430 1052 Pfam C-JID domain 887 1035 IPR045344 -
Vivi5g03430 1052 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 164 IPR035897 -
Vivi5g03430 1052 Gene3D Ribonuclease Inhibitor 713 875 IPR032675 -
Vivi5g03430 1052 Gene3D Ribonuclease Inhibitor 505 712 IPR032675 -
Vivi5g03430 1052 PRINTS Disease resistance protein signature 618 634 - -
Vivi5g03430 1052 PRINTS Disease resistance protein signature 221 236 - -
Vivi5g03430 1052 PRINTS Disease resistance protein signature 390 404 - -
Vivi5g03430 1052 PRINTS Disease resistance protein signature 297 311 - -
Vivi5g03430 1052 Pfam NB-ARC domain 206 425 IPR002182 GO:0043531
Vivi5g03430 1052 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 449 IPR027417 -
Vivi5g03430 1052 SUPERFAMILY L domain-like 552 827 - -
Vivi5g03430 1052 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 705 IPR044974 GO:0006952
Vivi5g03430 1052 Gene3D - 18 187 IPR035897 -
Vivi5g03430 1052 Pfam TIR domain 21 182 IPR000157 GO:0007165
Vivi5g03430 1052 SMART till_3 20 161 IPR000157 GO:0007165
Vivi5g03430 1052 SUPERFAMILY "Winged helix" DNA-binding domain 426 522 IPR036390 -
Vivi5g03430 1052 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 187 - -
Vivi5g03430 1052 Gene3D - 188 350 IPR027417 -
Vivi5g03430 1052 ProSiteProfiles Leucine-rich repeat profile. 783 804 IPR001611 GO:0005515
Vivi5g03430 1052 Gene3D - 355 439 IPR042197 -
Vivi5g03430 1052 ProSiteProfiles TIR domain profile. 19 186 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03430 Vivi-Chr5 126056584 126060784 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03430 15 861 WRKY Transcription Factor Family AT4G12020 28.749 1.00e-81 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03430 - - vvo:131605388 1137.48