Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03429 ATGGCCAGTACCAGCAATAGCAACTCTTCATCTCTGGTCACTTTTCCAAGGAGAAATTATTATGACGTGTTTGTGAGCTTTAGAGGCGAAGACACACGCTGCAACTTCGCTGATCATCTTTTTGCTGCATTTCAGAGAAAAGGTATTTTTGCATTTAGGGATGACACTAAGCTGAAGAAAGGTGAATCCATAGCACCTGAGCTATTTCGAGCAATCCAAGACTCTCAGATTTTTGTTGTGATATTTTCTAAGAACTATGCTTCCTCAACTTGGTGCTTGAGAGAATTGGAACACATCCTTCTTCAATGCGGTCAACTACCGGAAAAACGTGTTCTGCCTGTTTTCTATGATGTTGATCCTTCTGAAGTGAGACATCAAAAAGGAACTTATGGCGAAGCCTTAGCTAAACATGAGCAAAGATTCCAACAAGACCCTGAGAAGGTGCGAAGATGGACGGAAGCTCTATCACAAGTCACAGATCTCTCTGGATGGGATGTGTGTCATAAGCCACAACATGCAGAGATTGAAAAGATTGTTGAAGAGATTATAAGTATATTAGGTTGCAAGTTTTCAAGTCTTCCAAAAGATTTAGTAGGGATGCACTCTCCTATACACGAATTAGAAAAGCATTTACTTTTGGACTCACTTGATGATGTCCGTGTTGTAGGAATTTGTGGGATGGGTGGAATAGGGAAGACAACTCTCGCTACTACTTTATACAACAAAATCTCTCATCAATTTCATCTCTGCTGCATTATTGATGACTTGAGCAAAAGGTATAGGCAAGATGGTCCAATCAGTGCACAAAAGCAAATTTTACTTCAAATTGTAGGCGAAGAACAGCTTCAAACATGCACTTCATACAACACATATAACTTGATACGAAGTAGGCTACATCGTGTAAAGGCCCTTATAATTCTCGACAATGTTGATCAAGTTGAACAACTAGAGAAACTATCCGTGAGCCGTGAATGGTTAGGTGAGGGAAGTAGAGTCATTGTAATTTCTAGAGATGAGCATATCTTAAAAGAGTATGGAGTGGATGTTGTTTACAAAGTTCCACTCTTGAATGAAAATAACTCTCTTCAATTATTCAGTCGAAAAGCTTTCAAACTTGATCATATTGTGAATAGTTATGATAAGTTGGCATTTGACATACTACATTATGCAAATGGCTTGCCACTGGCAATTAAAGTATTGGGTTCATTTTTGTTTGGTCGTAGTATCTCTGAATGGAAAAGTGCATTGGCAAGATTAAGAAAAAGTCCAAACAAAGATATCATGGATGTGTTGCGATTAAGTTTTGATGGACTAGAAAAAACGGAAAAGGAAATATTTCTTCATATTGCTTGTTTTTTCCACTCTCGCAATGAGAAATATGTTACAAATGTTCTTAATTGTTGTGGATTTCATGTTGATATTGGATTAAGAGTTCTAATTGATAAATCACTTATAAGCCTTTCAGGAAAAAATTGTATTGAAATGCATAGTTTGTTAGAAGAGTTGGGCAAAAAAATTGTTCAGGAAAAATCGAGTAAGTGGAGCAGGGTGTGGCGCGAGAAACAGTTCTACAATATTAAATTAGAGAATATGGAAAAGAAGGTTGAAGCCATTTGTTCGCCAGGAACATATCATCTAATGGCCAACATGTTGTCAAAAATGATCCATCTAAGATTGCTCATACTGAATGGAGTTAATTCTACAGAAAACCTTACTAGTCTCACTAATGAGTTAAGATATGTGGAGTGGGATAAATATCCTTTCAAGTATTTGCCATCAATTTTTCAACCCAATCAACTTGTTGAATTGATCTTGAGGTACAGCAACATCAAACAACTATGTGAAGACAATAAGGTATTGTATATTCCCTTTTTGCTTCTTTTTTTTTCATTTATGAACATGAGCAAATCAGGAAAAAAAATGCAAACCCCCTCCCCTCCTCTCTTTATGGCATATTTTATGAAGCGAAATGAGATGTTGGTTCTATTTTTGTTGGTCTGGCAGTATTTTTCCAAGTTGAGAAGTTTGGATTTGAGCTACTCAAAAAATCTAATAAAGATGCCGGATTTTAGAGATATTCCACATCTTGAGCAACTAAGTTTTGAAGGATGTGTAAAACTGGTGAAGATGGATCCATCTATTGGTGTTCTAAAAAAGGTTGTTTTCTTGAATTTGAAAGATTGCAAAAATCTAGTAAGCATATCAAACAACATATTCAGTCTCAACTCTCTTGAATATGTTAATCTTTCTGGGTGTCCCAAAGTGTTTAAGAATCAAGGGCTTTTCAATATAAGTGGAAATGCATCACATTCCCAATCAACAACGTCCTCCATCTTGAAATGGACAGCATTTCGTTACCGTTCCTTGTACTCCCGCGCACACAAAGATTTAGCTAGTTGTTTGTTGCCCTTCTTGTCTAGCTTCTCTAACTTGCTTGAGCTTGATATTAGTTTTTGTGGTCTAAGCCAACTCCCTGATGCAATTGGATGTTTACGTTGGCTAGAAGAATTAGAATTAGGGGGAAACAATTTTGTAACGTTGCCTAGTCTGAAGGAACTTTGCAGACTTGCATATTTAAACTTGCAGCATTGCAAACTCTTGGAATATTTGCCTGAACTTCCTTTTCCTACTGCTATCGATCAGGAATTTCGAAAGAATAAATACATGAACAAAAAAGGATTGGTTATTTTCAATTGTCCTAAATTGAATGAGAGGGAACTTGGCAGTACTATCAATTTTTCATGGATGAAACAGTTTATTCAGGCAAACCAAGTACTCACTTCAATCTATAATGAGATTGATTTTGTAATTCCAGGAAGTGAAATACCAAGTTGGTGCAACAATCAGAGTGAGGGTCGTTCAATAAGAATAGATCTATCTCCTATTATGTCTGGCAATGACAATAATTGCAGCGGCATTGCTTGTTGTGCAATATTTTCTTTCTCAACTGTTGTCCCAACTATGACAAGTTATGCACAATGTTCTGACATGGAACTAGTTCTTTCTAACAGTGTATTTAACGGGAAGACTATTCGCATGATTCCAATAATTCTTGAAAGAGATCTTATTGAGATCGAATCAGATCACATGTGCCTAATCTATTTCCCTCTGAAAACATTCTTTTATTATCTGAAGATTATGGACAAAACTCTCGGCCATCAAGATCAATTTAAGGTGTATTTTAGAATTGGGAATCACAAATGTATGGGTTGGAAGGTTCAGAAGTGTGGGTATCATTGGGTATGTAAACAAGAACATGCATCGCTGCCGAAACTACTTAGCTCAGAAGTGCAAGTTTTTGGCAATTGA 3309 0.3666 MASTSNSNSSSLVTFPRRNYYDVFVSFRGEDTRCNFADHLFAAFQRKGIFAFRDDTKLKKGESIAPELFRAIQDSQIFVVIFSKNYASSTWCLRELEHILLQCGQLPEKRVLPVFYDVDPSEVRHQKGTYGEALAKHEQRFQQDPEKVRRWTEALSQVTDLSGWDVCHKPQHAEIEKIVEEIISILGCKFSSLPKDLVGMHSPIHELEKHLLLDSLDDVRVVGICGMGGIGKTTLATTLYNKISHQFHLCCIIDDLSKRYRQDGPISAQKQILLQIVGEEQLQTCTSYNTYNLIRSRLHRVKALIILDNVDQVEQLEKLSVSREWLGEGSRVIVISRDEHILKEYGVDVVYKVPLLNENNSLQLFSRKAFKLDHIVNSYDKLAFDILHYANGLPLAIKVLGSFLFGRSISEWKSALARLRKSPNKDIMDVLRLSFDGLEKTEKEIFLHIACFFHSRNEKYVTNVLNCCGFHVDIGLRVLIDKSLISLSGKNCIEMHSLLEELGKKIVQEKSSKWSRVWREKQFYNIKLENMEKKVEAICSPGTYHLMANMLSKMIHLRLLILNGVNSTENLTSLTNELRYVEWDKYPFKYLPSIFQPNQLVELILRYSNIKQLCEDNKVLYIPFLLLFFSFMNMSKSGKKMQTPSPPLFMAYFMKRNEMLVLFLLVWQYFSKLRSLDLSYSKNLIKMPDFRDIPHLEQLSFEGCVKLVKMDPSIGVLKKVVFLNLKDCKNLVSISNNIFSLNSLEYVNLSGCPKVFKNQGLFNISGNASHSQSTTSSILKWTAFRYRSLYSRAHKDLASCLLPFLSSFSNLLELDISFCGLSQLPDAIGCLRWLEELELGGNNFVTLPSLKELCRLAYLNLQHCKLLEYLPELPFPTAIDQEFRKNKYMNKKGLVIFNCPKLNERELGSTINFSWMKQFIQANQVLTSIYNEIDFVIPGSEIPSWCNNQSEGRSIRIDLSPIMSGNDNNCSGIACCAIFSFSTVVPTMTSYAQCSDMELVLSNSVFNGKTIRMIPIILERDLIEIESDHMCLIYFPLKTFFYYLKIMDKTLGHQDQFKVYFRIGNHKCMGWKVQKCGYHWVCKQEHASLPKLLSSEVQVFGN 1102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03429 1102 Gene3D - 188 350 IPR027417 -
Vivi5g03429 1102 Gene3D - 18 187 IPR035897 -
Vivi5g03429 1102 Pfam TIR domain 21 182 IPR000157 GO:0007165
Vivi5g03429 1102 Gene3D Ribonuclease Inhibitor 543 758 IPR032675 -
Vivi5g03429 1102 ProSiteProfiles Leucine-rich repeat profile. 833 854 IPR001611 GO:0005515
Vivi5g03429 1102 Pfam NB-ARC domain 206 425 IPR002182 GO:0043531
Vivi5g03429 1102 SUPERFAMILY L domain-like 546 938 - -
Vivi5g03429 1102 SUPERFAMILY "Winged helix" DNA-binding domain 426 522 IPR036390 -
Vivi5g03429 1102 Gene3D Ribonuclease Inhibitor 759 924 IPR032675 -
Vivi5g03429 1102 Pfam C-JID domain 937 1085 IPR045344 -
Vivi5g03429 1102 Gene3D - 355 439 IPR042197 -
Vivi5g03429 1102 PRINTS Disease resistance protein signature 297 311 - -
Vivi5g03429 1102 PRINTS Disease resistance protein signature 390 404 - -
Vivi5g03429 1102 PRINTS Disease resistance protein signature 668 684 - -
Vivi5g03429 1102 PRINTS Disease resistance protein signature 221 236 - -
Vivi5g03429 1102 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 164 IPR035897 -
Vivi5g03429 1102 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 449 IPR027417 -
Vivi5g03429 1102 SMART till_3 20 161 IPR000157 GO:0007165
Vivi5g03429 1102 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 894 IPR044974 GO:0006952
Vivi5g03429 1102 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 187 - -
Vivi5g03429 1102 ProSiteProfiles TIR domain profile. 19 186 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03429 Vivi-Chr5 126056583 126060786 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03429 15 911 WRKY Transcription Factor Family AT4G12020 27.987 6.13e-76 273