Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03428 ATGAGCAAAGATTCCAACAAGACCCTGAGAAGGTGCGAAGATGGACGGAAGCTCTATCACAAGTCACAGATCTCTCTGGATGGGATGTGTGTCATAAGAATTTGTGGGATGGGTGGAATAGGGAAGACAACTCTCGCTACTACTTTATACAACAAAATCTCTCATCAATTTCATCTCTGCTGCATTATTGATGACTTGAGCAAAAGGTATAGGCAAGATGGTCCAATCAGTGCACAAAAGCAAATTTTACTTCAAATTGTAGGCGAAGAACAGCTTCAAACATGCACTTCATACAACACATATAACTTGATACGAAGTAGGCTACATCGTGTAAAGGCCCTTATAATTCTCGACAATGTTGATCAAGTTGAACAACTAGAGAAACTATCCGTGAGCCGTGAATGGTTAGGTGAGGGAAGTAGAGTCATTGTAATTTCTAGAGATGAGCATATCTTAAAAGAGTATGGAGTGGATGTTGTTTACAAAGTTCCACTCTTGAATGAAAATAACTCTCTTCAATTATTCAGTCGAAAAGCTTTCAAACTTGATCATATTGTGAATAGTTATGATAAGTTGGCATTTGACATACTACATTATGCAAATGGCTTGCCACTGGCAATTAAAGTATTGGGTTCATTTTTGTTTGGTCGTAGTATCTCTGAATGGAAAAGTGCATTGGCAAGATTAAGAAAAAGTCCAAACAAAGATATCATGGATGTGTTGCGATTAAGTTTTGATGGACTAGAAAAAACGGAAAAGGAAATATTTCTTCATATTGCTTGTTTTTTCCACTCTCGCAATGAGAAATATGTTACAAATGTTCTTAATTGTTGTGGATTTCATGTTGATATTGGATTAAGAGTTCTAATTGATAAATCACTTATAAGCCTTTCAGGAAAAAATTGTATTGAAATGCATAGTTTGTTAGAAGAGTTGGGCAAAAAAATTGTTCAGGAAAAATCGAGTAAGTGGAGCAGGGTGTGGCGCGAGAAACAGTTCTACAATATTAAATTAGAGAATATGGAAAAGAAGGTTGAAGCCATTTGTTCGCCAGGAACATATCATCTAATGGCCAACATGTTGTCAAAAATGATCCATCTAAGATTGCTCATACTGAATGGAGTTAATTCTACAGAAAACCTTACTAGTCTCACTAATGAGTTAAGATATGTGGAGTGGGATAAATATCCTTTCAAGTATTTGCCATCAATTTTTCAACCCAATCAACTTGTTGAATTGATCTTGAGGTACAGCAACATCAAACAACTATGTGAAGACAATAAGGTATTGTATATTCCCTTTTTGCTTCTTTTTTTTTCATTTATGAACATGAGCAAATCAGGAAAAAAAATGCAAACCCCCTCCCCTCCTCTCTTTATGGCATATTTTATGAAGCGAAATGAGATGTTGGTTCTATTTTTGTTGGTCTGGCAGTATTTTTCCAAGTTGAGAAGTTTGGATTTGAGCTACTCAAAAAATCTAATAAAGATGCCGGATTTTAGAGATATTCCACATCTTGAGCAACTAAGTTTTGAAGGATGTGTAAAACTGGTGAAGATGGATCCATCTATTGGTGTTCTAAAAAAGGTTGTTTTCTTGAATTTGAAAGATTGCAAAAATCTAGTAAGCATATCAAACAACATATTCAGTCTCAACTCTCTTGAATATGTTAATCTTTCTGGGTGTCCCAAAGTGTTTAAGAATCAAGGGCTTTTCAATATAAGTGGAAATGCATCACATTCCCAATCAACAACGTCCTCCATCTTGAAATGGACAGCATTTCGTTACCGTTCCTTGTACTCCCGCGCACACAAAGATTTAGCTAGTTGTTTGTTGCCCTTCTTGTCTAGCTTCTCTAACTTGCTTGAGCTTGATATTAGTTTTTGTGGTCTAAGCCAACTCCCTGATGCAATTGGATGTTTACGTTGGCTAGAAGAATTAGAATTAGGGGGAAACAATTTTGTAACGTTGCCTAGTCTGAAGGAACTTTGCAGACTTGCATATTTAAACTTGCAGCATTGCAAACTCTTGGAATATTTGCCTGAACTTCCTTTTCCTACTGCTATCGATCAGGAATTTCGAAAGAATAAATACATGAACAAAAAAGGATTGGTTATTTTCAATTGTCCTAAATTGAATGAGAGGGAACTTGGCAGTACTATCAATTTTTCATGGATGAAACAGTTTATTCAGGCAAACCAAGTACTCACTTCAATCTATAATGAGATTGATTTTGTAATTCCAGGAAGTGAAATACCAAGTTGGTGCAACAATCAGAGTGAGGGTCGTTCAATAAGAATAGATCTATCTCCTATTATGTCTGGCAATGACAATAATTGCAGCGGCATTGCTTGTTGTGCAATATTTTCTTTCTCAACTGTTGTCCCAACTATGACAAGTTATGCACAATGTTCTGACATGGAACTAGTTCTTTCTAACAGTGTATTTAACGGGAAGACTATTCGCATGATTCCAATAATTCTTGAAAGAGATCTTATTGAGATCGAATCAGATCACATGTGCCTAATCTATTTCCCTCTGAAAACATTCTTTTATTATCTGAAGATTATGGACAAAACTCTCGGCCATCAAGATCAATTTAAGGTGTATTTTAGAATTGGGAATCACAAATGTATGGGTTGGAAGGTTCAGAAGTGTGGGTATCATTGGGTATGTAAACAAGAACATGCATCGCTGCCGAAACTACTTAGCTCAGAAGTGCAAGTTTTTGGCAATTGA 2739 0.3604 MSKDSNKTLRRCEDGRKLYHKSQISLDGMCVIRICGMGGIGKTTLATTLYNKISHQFHLCCIIDDLSKRYRQDGPISAQKQILLQIVGEEQLQTCTSYNTYNLIRSRLHRVKALIILDNVDQVEQLEKLSVSREWLGEGSRVIVISRDEHILKEYGVDVVYKVPLLNENNSLQLFSRKAFKLDHIVNSYDKLAFDILHYANGLPLAIKVLGSFLFGRSISEWKSALARLRKSPNKDIMDVLRLSFDGLEKTEKEIFLHIACFFHSRNEKYVTNVLNCCGFHVDIGLRVLIDKSLISLSGKNCIEMHSLLEELGKKIVQEKSSKWSRVWREKQFYNIKLENMEKKVEAICSPGTYHLMANMLSKMIHLRLLILNGVNSTENLTSLTNELRYVEWDKYPFKYLPSIFQPNQLVELILRYSNIKQLCEDNKVLYIPFLLLFFSFMNMSKSGKKMQTPSPPLFMAYFMKRNEMLVLFLLVWQYFSKLRSLDLSYSKNLIKMPDFRDIPHLEQLSFEGCVKLVKMDPSIGVLKKVVFLNLKDCKNLVSISNNIFSLNSLEYVNLSGCPKVFKNQGLFNISGNASHSQSTTSSILKWTAFRYRSLYSRAHKDLASCLLPFLSSFSNLLELDISFCGLSQLPDAIGCLRWLEELELGGNNFVTLPSLKELCRLAYLNLQHCKLLEYLPELPFPTAIDQEFRKNKYMNKKGLVIFNCPKLNERELGSTINFSWMKQFIQANQVLTSIYNEIDFVIPGSEIPSWCNNQSEGRSIRIDLSPIMSGNDNNCSGIACCAIFSFSTVVPTMTSYAQCSDMELVLSNSVFNGKTIRMIPIILERDLIEIESDHMCLIYFPLKTFFYYLKIMDKTLGHQDQFKVYFRIGNHKCMGWKVQKCGYHWVCKQEHASLPKLLSSEVQVFGN 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03428 912 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 259 IPR027417 -
Vivi5g03428 912 Gene3D Ribonuclease Inhibitor 572 728 IPR032675 -
Vivi5g03428 912 Pfam NB-ARC domain 29 235 IPR002182 GO:0043531
Vivi5g03428 912 PRINTS Disease resistance protein signature 478 494 - -
Vivi5g03428 912 PRINTS Disease resistance protein signature 31 46 - -
Vivi5g03428 912 PRINTS Disease resistance protein signature 107 121 - -
Vivi5g03428 912 PRINTS Disease resistance protein signature 200 214 - -
Vivi5g03428 912 Gene3D - 3 159 IPR027417 -
Vivi5g03428 912 ProSiteProfiles Leucine-rich repeat profile. 643 664 IPR001611 GO:0005515
Vivi5g03428 912 SUPERFAMILY L domain-like 355 748 - -
Vivi5g03428 912 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 27 565 IPR044974 GO:0006952
Vivi5g03428 912 Gene3D Ribonuclease Inhibitor 353 571 IPR032675 -
Vivi5g03428 912 Pfam C-JID domain 747 895 IPR045344 -
Vivi5g03428 912 SUPERFAMILY "Winged helix" DNA-binding domain 236 332 IPR036390 -
Vivi5g03428 912 Gene3D - 165 249 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03428 Vivi-Chr5 126056578 126060304 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03428 32 721 WRKY Transcription Factor Family AT4G12020 28.830 1.51e-59 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03428 - - vvo:131605388 832.017