Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03426 ATGGCCAGCACCAGCAGCACCTCTTCAGCTTTGGTGACATCAACAAGGAGAAACTATTTTGATGTGTTTGTGAGCTTTAGAGGTAAAGATACTCGCTTCAATTTCACCGATCATATTTTTGCAGCCCTCCAAAGAAACGGTATTTCTGCATTCAGGGATGACACTAAACTCAACAAAGGTGAATCCATAGCACCTGAACTCCTTCGAGCAATAGAAGACTCTCAGATTTTCATTGTGGTTTTCTCAAAGAACTATGCTTTTTCAACTTGGTGCTTGAGAGAATTGGAACACATCCTTCTTCACTGCGGTCAACCACCAGTAAAACGTGTTCTGCCTGTTTTCTATGATGTTGATCCTTCTGAGGTGAGACATCAAAAAGGAACTTATGGTAAAGCCTTAGCTAAACATGAACAAAGATTCCAACAAGACTATGAAAAGGTACGAAGATGGAGGGAAGCTCTAGCACAAGTCGCAAATCTCTCTGGCTGGGATGTGTGTCATAAGCCAGAATATGCGGAGATTGAAAAGATTGTTGAAGAGATTATAAAGATATTAGGTTGCAAGTTTTCAAGTCTTCCAAAACATTTAGTAGGGATACACTCTCCTATACAAGAATTAGAAAAGCATTTACTTTTGGACTCACTTGATGATGTCCGTGTTTTAGGGATTTGCGGGATGGGTGGAATTGGGAAGACAACTCTCGCTAAAGCCTTATACAACAAAATCTCTCATCAATTTGATGTATGCTGCTTTATTGACGATTTATGCAAAAGTTTTAGGCAAGATGGTCCGATTAGTGCACCAAAACAAATTCTACTTCAAACTGTAGGCAATCAACCGCTTCAAACATACAACTCTTGCAACATATCTAACCAGATAAGAAGTAGGCTACATCGTGTAAGGGCGCTTATAACTATTGACAATGTTGATCAAGTTAAGCAACTTGGGAATTTAGATCGTGAATGGTTTGGTCCGGGGAGCAGAATAATTATAATTTCTAGAGATGAGCATATCTTAAAAGAGTATGAAGTGGATGTTGTTTACAAAGTTCAACTCTTGAATCAAAAAGACTCTCTTCAATTACTAAGTCGAAAAGCTTTCAAACTTGATCATATTGTGAGTAGTTATGATAGGTTGGCATTTGAGATACTAGATTATACAAATGGCTTGCCACTGGCAATTGATGTATTGGGTTCGTTTTTGTTCGATCGTAATATCTCTGAATGGGAAAGTGCATTGGCAAGATTGAGAGAAAGGCCAAACAAAGATATCATGGATGTGTTGCGATTAAGTTTTGATGGGTTGGAGGAACCGGAACAAGAAATATTCCTTCATATTGCTTGTTTTTTCAATCGTGGCAGTAAGAAATATGTTACGAATGTTCTTAATTGTTGTGGATTTGAAACTGATATCGGATTAAGAGTTCTAATTGATAAATCACTTATAAGCCTTGAGTCAGAAGGTATATTTGGAATGCATGGTTTACTGGTTATGTTCGGCCAAAAACTAGTTCAAGAAAAATCAAGAAAGTGGAAGAGGGTGTGGGATAGGGAACAATTCTACAATGTTAAGTTGGAGAATATGGAAAAGAAGGTTGAAGTCATTTGTTGCTTAGGCGCACCATATGATTTCATTATCTTGGATGAAACATTGTCAAAAATGAGCCATTTAAGATTGCTCATTCTGCAGAGAGTTGATTTTTTAGGAAACCTCAACTGCCTTTCTAACGAGTTAAGATACATGGAGTGGTATGAATATCCTTTCAAGTATTTTCCATCAAGTTTTCAGCCTAATCAACTTGTTGAGTTGATCTTGAGGCACAGCAGCATCACACAACTATGGAAAGACAAAGCTAAGAAGTATTTTCCCCATTTGAGGAATTTGGATCTGAGCCACTCAAAAAATCTACAAAAGATGCCAGATTTTAGAGATATCCCAAATCTGGAGCGATTAAATTTTGAAGGATGTGTAAAGTTGGTGCAGATGGATCCTTCTATTGGGGTTCTAAAAAAGCTTGTTTTCTTGAATTTGAAAGATTGCAAAAATCTAGCAAGCATACCAGACAACATATTTGATCTCAGCTCTATTGAATATGTAAATCTTTCAGGATGTCACAAAATTTTTAAGAATCATAGGATTTTGAATATAAGTGGTAACACATCACATTCCGAATCAACAACCTCCTCCTTCTTGAAATGGACAGCACTTCGTTACCATTCCTTGTACTCTCGCGCACACAAAGATTTAGCTAGTTGTTTGTTGCCTTTCTTGGTTAACTTCTCTAGCTTGGTTGAACTTGATATTAGTTTTTGTGGTCTAACGGAACTCCCTGATGCAATTGGATGTTTACATTGGCTAGAAGAGTTAAATTTAGGGGGAAACAAATTTGTAACATTACCTAGTCTGAAGGAGATTTGTAGACTTGCATTTTTAAAATTGGAGCATTGCAAGCTCTTGGAATCTTTGCCTCAGCTTCCTTTTCCTACTGCTAAAAAAGATATGATCAGAAAAGGATTGATCATTTTCAATTGTCCTAAATTGAGTGAGAGGGAACTTGGCAGTACTATCAATTTTTCATGGATGCCACAGTTTATTCAGGCAAACCAAGTATTCTCTTCAATCAAAGATGGGATTTATTTTGTAGTTCCGGGAAGTGAAATACCAAGTTGGTGCAGCAACCAGAGTGGGGGTGATCCAATAAGAATAGATCTATCTCCCATCATGCATAACAATGACCATAACTTCAGTGGCATTGCTTGTTGTGCAATATTTTATGTTGAACCAACTATGACAACATATGCACAAGGACCTGATATAGGAATTTCGTTATGTATTTTTGGAAGCGGGTTTGCGTGGGATAGACACATTCCAGTGAATCTTAAAATGGATCTTATTGAGATCGGATCAGATCACATGTGCCTAATGTATATCCCTTTGAATTTATTTTTTTTTCATTTTAAAGAAAACAAAACTCTCAGGCATCTTGATCATTTTGAGGTGTATGTTAAAATTAGTAATAGCCAAGGTATGCATTTGAATTGTATGAATTGGAAGGTCCAAAAGTCCGGGTATCAATGGATATGTAAACAAGATCAGGTGTCGCCGGAAGTGCAAGCTTTTAGCAATTGA 3129 0.3717 MASTSSTSSALVTSTRRNYFDVFVSFRGKDTRFNFTDHIFAALQRNGISAFRDDTKLNKGESIAPELLRAIEDSQIFIVVFSKNYAFSTWCLRELEHILLHCGQPPVKRVLPVFYDVDPSEVRHQKGTYGKALAKHEQRFQQDYEKVRRWREALAQVANLSGWDVCHKPEYAEIEKIVEEIIKILGCKFSSLPKHLVGIHSPIQELEKHLLLDSLDDVRVLGICGMGGIGKTTLAKALYNKISHQFDVCCFIDDLCKSFRQDGPISAPKQILLQTVGNQPLQTYNSCNISNQIRSRLHRVRALITIDNVDQVKQLGNLDREWFGPGSRIIIISRDEHILKEYEVDVVYKVQLLNQKDSLQLLSRKAFKLDHIVSSYDRLAFEILDYTNGLPLAIDVLGSFLFDRNISEWESALARLRERPNKDIMDVLRLSFDGLEEPEQEIFLHIACFFNRGSKKYVTNVLNCCGFETDIGLRVLIDKSLISLESEGIFGMHGLLVMFGQKLVQEKSRKWKRVWDREQFYNVKLENMEKKVEVICCLGAPYDFIILDETLSKMSHLRLLILQRVDFLGNLNCLSNELRYMEWYEYPFKYFPSSFQPNQLVELILRHSSITQLWKDKAKKYFPHLRNLDLSHSKNLQKMPDFRDIPNLERLNFEGCVKLVQMDPSIGVLKKLVFLNLKDCKNLASIPDNIFDLSSIEYVNLSGCHKIFKNHRILNISGNTSHSESTTSSFLKWTALRYHSLYSRAHKDLASCLLPFLVNFSSLVELDISFCGLTELPDAIGCLHWLEELNLGGNKFVTLPSLKEICRLAFLKLEHCKLLESLPQLPFPTAKKDMIRKGLIIFNCPKLSERELGSTINFSWMPQFIQANQVFSSIKDGIYFVVPGSEIPSWCSNQSGGDPIRIDLSPIMHNNDHNFSGIACCAIFYVEPTMTTYAQGPDIGISLCIFGSGFAWDRHIPVNLKMDLIEIGSDHMCLMYIPLNLFFFHFKENKTLRHLDHFEVYVKISNSQGMHLNCMNWKVQKSGYQWICKQDQVSPEVQAFSN 1042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03426 1042 Gene3D - 14 186 IPR035897 -
Vivi5g03426 1042 SMART till_3 19 160 IPR000157 GO:0007165
Vivi5g03426 1042 Gene3D - 187 348 IPR027417 -
Vivi5g03426 1042 Pfam NB-ARC domain 203 422 IPR002182 GO:0043531
Vivi5g03426 1042 Pfam C-JID domain 882 1015 IPR045344 -
Vivi5g03426 1042 SUPERFAMILY "Winged helix" DNA-binding domain 423 513 IPR036390 -
Vivi5g03426 1042 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 446 IPR027417 -
Vivi5g03426 1042 PRINTS Disease resistance protein signature 296 310 - -
Vivi5g03426 1042 PRINTS Disease resistance protein signature 387 401 - -
Vivi5g03426 1042 PRINTS Disease resistance protein signature 620 636 - -
Vivi5g03426 1042 PRINTS Disease resistance protein signature 220 235 - -
Vivi5g03426 1042 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 707 IPR044974 GO:0006952
Vivi5g03426 1042 SUPERFAMILY L domain-like 545 823 - -
Vivi5g03426 1042 Gene3D Ribonuclease Inhibitor 708 876 IPR032675 -
Vivi5g03426 1042 Pfam TIR domain 20 182 IPR000157 GO:0007165
Vivi5g03426 1042 Gene3D Ribonuclease Inhibitor 542 707 IPR032675 -
Vivi5g03426 1042 Gene3D - 352 436 IPR042197 -
Vivi5g03426 1042 ProSiteProfiles TIR domain profile. 18 185 IPR000157 GO:0007165
Vivi5g03426 1042 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 187 - -
Vivi5g03426 1042 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 163 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03426 Vivi-Chr5 126034643 126038837 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03426 20 801 WRKY Transcription Factor Family AT4G12020 31.051 1.68e-82 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03426 - - tpra:123883787 1063.52