Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03425 ATGGCCAGCACCAGCAGCACCTCTTCAGCTTTGGTGACATCAACAAGGAGAAACTATTTTGATGTGTTTGTGAGCTTTAGAGGTAAAGATACTCGCTTCAATTTCACCGATCATATTTTTGCAGCCCTCCAAAGAAACGGTATTTCTGCATTCAGGGATGACACTAAACTCAACAAAGGTGAATCCATAGCACCTGAACTCCTTCGAGCAATAGAAGACTCTCAGATTTTCATTGTGGTTTTCTCAAAGAACTATGCTTTTTCAACTTGGTGCTTGAGAGAATTGGAACACATCCTTCTTCACTGCGGTCAACCACCAGTAAAACGTGTTCTGCCTGTTTTCTATGATGTTGATCCTTCTGAGGTGAGACATCAAAAAGGAACTTATGGTAAAGCCTTAGCTAAACATGAACAAAGATTCCAACAAGACTATGAAAAGGTACGAAGATGGAGGGAAGCTCTAGCACAAGTCGCAAATCTCTCTGGCTGGGATGTGTGTCATAAGCCAGAATATGCGGAGATTGAAAAGATTGTTGAAGAGATTATAAAGATATTAGGGATTTGCGGGATGGGTGGAATTGGGAAGACAACTCTCGCTAAAGCCTTATACAACAAAATCTCTCATCAATTTGATGTATGCTGCTTTATTGACGATTTATGCAAAAGTTTTAGGCAAGATGGTCCGATTAGTGCACCAAAACAAATTCTACTTCAAACTGTAGGCAATCAACCGCTTCAAACATACAACTCTTGCAACATATCTAACCAGATAAGAAGTAGGCTACATCGTGTAAGGGCGCTTATAACTATTGACAATGTTGATCAAGTTAAGCAACTTGGGAATTTAGATCGTGAATGGTTTGGTCCGGGGAGCAGAATAATTATAATTTCTAGAGATGAGCATATCTTAAAAGAGTATGAAGTGGATGTTGTTTACAAAGTTCAACTCTTGAATCAAAAAGACTCTCTTCAATTACTAAGTCGAAAAGCTTTCAAACTTGATCATATTGTGAGTAGTTATGATAGGTTGGCATTTGAGATACTAGATTATACAAATGGCTTGCCACTGGCAATTGATGTATTGGGTTCGTTTTTGTTCGATCGTAATATCTCTGAATGGGAAAGTGCATTGGCAAGATTGAGAGAAAGGCCAAACAAAGATATCATGGATGTGTTGCGATTAAGTTTTGATGGGTTGGAGGAACCGGAACAAGAAATATTCCTTCATATTGCTTGTTTTTTCAATCGTGGCAGTAAGAAATATGTTACGAATGTTCTTAATTGTTGTGGATTTGAAACTGATATCGGATTAAGAGTTCTAATTGATAAATCACTTATAAGCCTTGAGTCAGAAGGTATATTTGGAATGCATGGTTTACTGGTTATGTTCGGCCAAAAACTAGTTCAAGAAAAATCAAGAAAGTGGAAGAGGGTGTGGGATAGGGAACAATTCTACAATGTTAAGTTGGAGAATATGGAAAAGAAGGTTGAAGTCATTTGTTGCTTAGGCGCACCATATGATTTCATTATCTTGGATGAAACATTGTCAAAAATGAGCCATTTAAGATTGCTCATTCTGCAGAGAGTTGATTTTTTAGGAAACCTCAACTGCCTTTCTAACGAGTTAAGATACATGGAGTGGTATGAATATCCTTTCAAGTATTTTCCATCAAGTTTTCAGCCTAATCAACTTGTTGAGTTGATCTTGAGGCACAGCAGCATCACACAACTATGGAAAGACAAAGCTAAGAAGTATTTTCCCCATTTGAGGAATTTGGATCTGAGCCACTCAAAAAATCTACAAAAGATGCCAGATTTTAGAGATATCCCAAATCTGGAGCGATTAAATTTTGAAGGATGTGTAAAGTTGGTGCAGATGGATCCTTCTATTGGGGTTCTAAAAAAGCTTGTTTTCTTGAATTTGAAAGATTGCAAAAATCTAGCAAGCATACCAGACAACATATTTGATCTCAGCTCTATTGAATATGTAAATCTTTCAGGATGTCACAAAATTTTTAAGAATCATAGGATTTTGAATATAAGTGGTAACACATCACATTCCGAATCAACAACCTCCTCCTTCTTGAAATGGACAGCACTTCGTTACCATTCCTTGTACTCTCGCGCACACAAAGATTTAGCTAGTTGTTTGTTGCCTTTCTTGGTTAACTTCTCTAGCTTGGTTGAACTTGATATTAGTTTTTGTGGTCTAACGGAACTCCCTGATGCAATTGGATGTTTACATTGGCTAGAAGAGTTAAATTTAGGGGGAAACAAATTTGTAACATTACCTAGTCTGAAGGAGATTTGTAGACTTGCATTTTTAAAATTGGAGCATTGCAAGCTCTTGGAATCTTTGCCTCAGCTTCCTTTTCCTACTGCTAAAAAAGATATGATCAGAAAAGGATTGATCATTTTCAATTGTCCTAAATTGAGTGAGAGGGAACTTGGCAGTACTATCAATTTTTCATGGATGCCACAGTTTATTCAGGCAAACCAAGTATTCTCTTCAATCAAAGATGGGATTTATTTTGTAGTTCCGGGAAGTGAAATACCAAGTTGGTGCAGCAACCAGAGTGGGGGTGATCCAATAAGAATAGATCTATCTCCCATCATGCATAACAATGACCATAACTTCAGTGGCATTGCTTGTTGTGCAATATTTTATGTTGAACCAACTATGACAACATATGCACAAGGACCTGATATAGGAATTTCGTTATGTATTTTTGGAAGCGGGTTTGCGTGGGATAGACACATTCCAGTGAATCTTAAAATGGATCTTATTGAGATCGGATCAGATCACATGTGCCTAATGTATATCCCTTTGAATTTATTTTTTTTTCATTTTAAAGAAAACAAAACTCTCAGGCATCTTGATCATTTTGAGGTGTATGTTAAAATTAGTAATAGCCAAGGTATGCATTTGAATTGTATGAATTGGAAGGTCCAAAAGTCCGGGTATCAATGGATATGTAAACAAGATCAGGTGTCGCCGGAAGTGCAAGCTTTTAGCAATTGA 3021 0.3724 MASTSSTSSALVTSTRRNYFDVFVSFRGKDTRFNFTDHIFAALQRNGISAFRDDTKLNKGESIAPELLRAIEDSQIFIVVFSKNYAFSTWCLRELEHILLHCGQPPVKRVLPVFYDVDPSEVRHQKGTYGKALAKHEQRFQQDYEKVRRWREALAQVANLSGWDVCHKPEYAEIEKIVEEIIKILGICGMGGIGKTTLAKALYNKISHQFDVCCFIDDLCKSFRQDGPISAPKQILLQTVGNQPLQTYNSCNISNQIRSRLHRVRALITIDNVDQVKQLGNLDREWFGPGSRIIIISRDEHILKEYEVDVVYKVQLLNQKDSLQLLSRKAFKLDHIVSSYDRLAFEILDYTNGLPLAIDVLGSFLFDRNISEWESALARLRERPNKDIMDVLRLSFDGLEEPEQEIFLHIACFFNRGSKKYVTNVLNCCGFETDIGLRVLIDKSLISLESEGIFGMHGLLVMFGQKLVQEKSRKWKRVWDREQFYNVKLENMEKKVEVICCLGAPYDFIILDETLSKMSHLRLLILQRVDFLGNLNCLSNELRYMEWYEYPFKYFPSSFQPNQLVELILRHSSITQLWKDKAKKYFPHLRNLDLSHSKNLQKMPDFRDIPNLERLNFEGCVKLVQMDPSIGVLKKLVFLNLKDCKNLASIPDNIFDLSSIEYVNLSGCHKIFKNHRILNISGNTSHSESTTSSFLKWTALRYHSLYSRAHKDLASCLLPFLVNFSSLVELDISFCGLTELPDAIGCLHWLEELNLGGNKFVTLPSLKEICRLAFLKLEHCKLLESLPQLPFPTAKKDMIRKGLIIFNCPKLSERELGSTINFSWMPQFIQANQVFSSIKDGIYFVVPGSEIPSWCSNQSGGDPIRIDLSPIMHNNDHNFSGIACCAIFYVEPTMTTYAQGPDIGISLCIFGSGFAWDRHIPVNLKMDLIEIGSDHMCLMYIPLNLFFFHFKENKTLRHLDHFEVYVKISNSQGMHLNCMNWKVQKSGYQWICKQDQVSPEVQAFSN 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03425 1006 SMART till_3 19 160 IPR000157 GO:0007165
Vivi5g03425 1006 Gene3D Ribonuclease Inhibitor 672 840 IPR032675 -
Vivi5g03425 1006 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 671 IPR044974 GO:0006952
Vivi5g03425 1006 Pfam NB-ARC domain 182 386 IPR002182 GO:0043531
Vivi5g03425 1006 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 410 IPR027417 -
Vivi5g03425 1006 Gene3D Ribonuclease Inhibitor 506 671 IPR032675 -
Vivi5g03425 1006 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 187 - -
Vivi5g03425 1006 PRINTS Disease resistance protein signature 584 600 - -
Vivi5g03425 1006 PRINTS Disease resistance protein signature 351 365 - -
Vivi5g03425 1006 PRINTS Disease resistance protein signature 260 274 - -
Vivi5g03425 1006 PRINTS Disease resistance protein signature 184 199 - -
Vivi5g03425 1006 SUPERFAMILY L domain-like 509 787 - -
Vivi5g03425 1006 Pfam TIR domain 20 181 IPR000157 GO:0007165
Vivi5g03425 1006 Pfam C-JID domain 846 979 IPR045344 -
Vivi5g03425 1006 SUPERFAMILY "Winged helix" DNA-binding domain 387 477 IPR036390 -
Vivi5g03425 1006 ProSiteProfiles TIR domain profile. 18 185 IPR000157 GO:0007165
Vivi5g03425 1006 Gene3D - 1 157 IPR035897 -
Vivi5g03425 1006 Gene3D - 158 312 IPR027417 -
Vivi5g03425 1006 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 163 IPR035897 -
Vivi5g03425 1006 Gene3D - 316 400 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03425 Vivi-Chr5 126034639 126038838 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03425 20 765 WRKY Transcription Factor Family AT4G12020 30.098 8.17e-76 271