Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03410 ATGGAGGGGACACGAGAAGATGCACGGCCGTCAGAGCAAAGGCAATCCAATGTGTCACACTGGCCTTCAGATTTCGTTGGAAAATTTGGATCTGTTTCTTTGGGACCTCAAGATGAGACCTTAAGTAATAAAGAATCACCTAGATATTCTAACCAAGATTTTATGTCACCTCAGAGGGCATCACAAGTTCTCTGGCACACTGGAATGCTATCTGAACCAATACCAAATGGTTTTTACTCCGTTGTTCCGGAGAAAAGGCTCAAGAAACTTTTTGATAGTATTCCTACTCTGGAGGATCTTCAAGCTTTGGGTGGAGAGGGGTTTAAGGCTGATGTCATTGTTGTGGATGCAAAGAAAGATAGAAAGTTATCTATGCTGAAGCAACTAATTGTCACATTGGTCAAGGGATTGAGCACAAATCCAGCTGCAATAATTAAGAAGATAGCTGGATTAGTTTCTGATTTCTATAAGCGGGCAAATGTAGAAAGTCCAGCAAAAGCTGCACTTGAAGAATCCTCTCACATGTTTGAAAGTCGCGGTGTCCAGATGCTGGGGCAAATAAAGCATGGTTCATGCCGTCCTCGAGCTATCTTATTTAAAGTATTAGCAGATACTGTAGGTCTTGAAAGTAGGCTTATGATGGGTTTTCCAAATGAGGGGGCTGCTGATTGTGTAGACTCTTACAAGCATATGTCTGTGATAGTTGTGTTAAATTCTGTGGAACTGCTGGTTGATCTAATGCGCTTTCCTGGCCAACTGTTACCACGATCAATCAAGTCAATTCTTATGACACACATTTCTGCAGCGGGAGAGAGTGATTCAGCAGAAAATGATTCATGTGATTCACCATTAGAACCAAACAGTCCTTTATATGGAGTTTCAGAGAGTGCTGAAAAAGACGAACATCTCCAATTCCATAGAAGATTTGAAACATCTTTAAATGTATCTGGTCCTAGCTTGCGAAGCATGATGTTACGATCAAATTCCAATCTGGAAGGGAAATTAAGTTTGTCTCATAGTGAACCCAACATTGCAACTTCATTTGGTCGGCGCAGTCGAAGAAAGGTCATTGCTGAACAGAGGACTGCTAGTTCAAGTCCTGAACATCCATTATTTCAAGCTCGTGGGCAGTCTAAGCTTGGCCGTGACAAGACTGCATTTAGAGATTTTGCTGACGACCAGGCTACATCAAGATCCAGCTATAAGTCAGATGGTGCATCCTCATCAGAAGCTCGTAGAATACGACGAAGAAGCATCAGTATTACACCAGAGATTGGTGATGATATTGTAAGGGCTGTGCGAGCAATGAATGAAAAACTAAAGCAAAACCGTCATCTAAGGGAACAAGGGGATGATGGTTCCTTGCCTCATTCTCCCAATGATAGAATTAACAGTGCAGAGCTTCAGAAAAATCTGTCAAATTTCTGTCATGCTGGTCATCATGGAACATCCCCCTTATTTCCGCTGCATCGTGACAATGCAAATTCTCAGAAGGCAATGTCATTACCCTCTTCACCACATGATTATCGAGATCAAACTTCCGAGACAAGCAGGCCACCGCGATATGAATTGAATGATGAACTGGAGTCAACTTGGAATAAAATCCTTGAATCATCAATGTCGAATAATAAACCTCTATTACCATATGAAGAGTGGAACATTGATTTCTCAGAATTGACTGTTGGAACTCGAGTTGGGATCGGGTTCTTTGGAGAAGTTTTCCGTGGCATATGGAATGGCACAGATGTTGCAATCAAAGTTTTCCTTGAGCAAGATTTAACTGCTGAAAACATGGAAGATTTCTGCAATGAGATATCCATTCTCAGCCGACTCAGACATCCTAATGTCATCTTATTTCTTGGTGCATGCACAAAACCTCCACGGTTGTCAATGGTGACCGAATATATGGAAATGGGATCTTTGTTCTACTTGATTCATGTGAGCGGTCAAAAAAAGAAGCTTAGTTGGCGAAGAAGACTAAAGATGCTGCGTGACATATGCAGGGGCTTGATGCATATTCATCGAATGAAGATTATTCACCGTGATGTGAAAAGTGCTAATTGCCTCGTGGATAAGCATTGGACAGTGAAAATATGTGATTTTGGACTTTCTAGAATAATTATAGATTCTCCAATGAAAGATTCTTCTTCAGCTGGAACACCTGAATGGATGGCTCCTGAACTAATTCGAAATGAACCGTTCACTGAAAAATGTGATATCTTTAGCTTAGGGGTGATAATGTGGGAGCTCTGCAACTTGAGTAGGCCTTGGGAAGGCGTCCCTCCAGAGAGGGTGGTTTATACTGTTGCTAATGAGGGTTCCAGATTGGAGATTCCTGAAGGTCCGCTAGGCAGGCTGATTTCAGAGTGCTGGGCTGAACCGTATGAGCGACCAAGTTGTGAGGAGATATTGTCTCGCTTGGTGGACATCGAGTACTCAATGTCCTGA 2448 0.422 MEGTREDARPSEQRQSNVSHWPSDFVGKFGSVSLGPQDETLSNKESPRYSNQDFMSPQRASQVLWHTGMLSEPIPNGFYSVVPEKRLKKLFDSIPTLEDLQALGGEGFKADVIVVDAKKDRKLSMLKQLIVTLVKGLSTNPAAIIKKIAGLVSDFYKRANVESPAKAALEESSHMFESRGVQMLGQIKHGSCRPRAILFKVLADTVGLESRLMMGFPNEGAADCVDSYKHMSVIVVLNSVELLVDLMRFPGQLLPRSIKSILMTHISAAGESDSAENDSCDSPLEPNSPLYGVSESAEKDEHLQFHRRFETSLNVSGPSLRSMMLRSNSNLEGKLSLSHSEPNIATSFGRRSRRKVIAEQRTASSSPEHPLFQARGQSKLGRDKTAFRDFADDQATSRSSYKSDGASSSEARRIRRRSISITPEIGDDIVRAVRAMNEKLKQNRHLREQGDDGSLPHSPNDRINSAELQKNLSNFCHAGHHGTSPLFPLHRDNANSQKAMSLPSSPHDYRDQTSETSRPPRYELNDELESTWNKILESSMSNNKPLLPYEEWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLFYLIHVSGQKKKLSWRRRLKMLRDICRGLMHIHRMKIIHRDVKSANCLVDKHWTVKICDFGLSRIIIDSPMKDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCNLSRPWEGVPPERVVYTVANEGSRLEIPEGPLGRLISECWAEPYERPSCEEILSRLVDIEYSMS 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03410 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 678 690 IPR008271 GO:0004672|GO:0006468
Vivi5g03410 815 MobiDBLite consensus disorder prediction 272 292 - -
Vivi5g03410 815 CDD STKc_MAP3K-like 565 807 - -
Vivi5g03410 815 SMART serkin_6 559 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g03410 815 MobiDBLite consensus disorder prediction 1 53 - -
Vivi5g03410 815 MobiDBLite consensus disorder prediction 496 521 - -
Vivi5g03410 815 ProSiteProfiles Protein kinase domain profile. 559 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g03410 815 MobiDBLite consensus disorder prediction 35 53 - -
Vivi5g03410 815 Pfam Protein tyrosine and serine/threonine kinase 560 807 IPR001245 GO:0004672|GO:0006468
Vivi5g03410 815 Gene3D Transferase(Phosphotransferase) domain 1 638 814 - -
Vivi5g03410 815 FunFam Serine/threonine-protein kinase isoform 1 549 637 - -
Vivi5g03410 815 SUPERFAMILY Protein kinase-like (PK-like) 534 807 IPR011009 -
Vivi5g03410 815 MobiDBLite consensus disorder prediction 496 510 - -
Vivi5g03410 815 MobiDBLite consensus disorder prediction 358 415 - -
Vivi5g03410 815 MobiDBLite consensus disorder prediction 441 463 - -
Vivi5g03410 815 MobiDBLite consensus disorder prediction 441 455 - -
Vivi5g03410 815 MobiDBLite consensus disorder prediction 392 407 - -
Vivi5g03410 815 Pfam Ethylene-responsive protein kinase Le-CTR1 58 253 - -
Vivi5g03410 815 Gene3D Phosphorylase Kinase; domain 1 552 637 - -
Vivi5g03410 815 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 288 807 - -
Vivi5g03410 815 ProSitePatterns Protein kinases ATP-binding region signature. 565 586 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03410 Vivi-Chr5 125801093 125818792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03410 1 814 MAP Kinase Kinase Kinase AT3G58640 69.512 0.0 1150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Vivi5g03410 PK_Tyr_Ser-Thr 9.5e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03410 - - gmx:100807193 1396.72