Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03403 ATGCGTCCACCAATGAAAAAAATCAATTACAATGTTAGAGACAAAGTGGAAGTATGCAGTAGAGAAGAAGGGTTTGTGGGTTCGTACTACAACGCTACAATTGTTTCGTGTCTTGAGAAACAAAAATATGTCGTCCGTTACAAGAATTTGTTGTTAGACGATGGGTCCGGACCTCTCACGGAAACGATTTATTCAAGGGAGCTTCGTCCATTACCACCACGCGTTCGTAATCCACATGAATTTCATCTCAACCAAAAAGTGGATGTTTTTGATAACGATGGTTGGTGGTTAGGAGAAATTGCTAGTGAAAAAATCTGCTCAGATAATTGTTATTACTATAAGGTGTATTTCAATACTACCTTTGAGACAATTTATTATTCTCTTGATCGAATTAGGGTTCATCATGAGTGGCGTTATGGAGAGTGGATATTGGAAGCATAA 441 0.381 MRPPMKKINYNVRDKVEVCSREEGFVGSYYNATIVSCLEKQKYVVRYKNLLLDDGSGPLTETIYSRELRPLPPRVRNPHEFHLNQKVDVFDNDGWWLGEIASEKICSDNCYYYKVYFNTTFETIYYSLDRIRVHHEWRYGEWILEA 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03403 146 Pfam Agenet domain 14 73 IPR008395 -
Vivi5g03403 146 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 10 143 - -
Vivi5g03403 146 SMART agenet_At_2 79 139 IPR014002 -
Vivi5g03403 146 SMART agenet_At_2 8 76 IPR014002 -
Vivi5g03403 146 CDD Tudor_Agenet_AtDUF_rpt1_3 14 73 - -
Vivi5g03403 146 Gene3D - 1 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03403 Vivi-Chr5 125651701 125652141 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03403 20 137 PHD Transcription Factor Family AT5G58610 29.710 4.48e-13 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03403 - - cam:101489110 203.756
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03403 5 125651701 125652141 Vivi5g03403 5 125651701 125652141 ECH