Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03382 ATGAGGAACACCAGAGGAGAGATAGTTCAAGTTGAAGGAGGACACATAGTTCGATCCTCCGGTAAGAAAGATCGTCACAGCAAGGTTTACACATCGAAAGGACCTCGCGATCGCAGGGTTCGTCTCTCAGCACACACTGCCATTGAATTCTACGATGTTCAAGATCGTCTTGGCTATGACAGACCAAGTAGAGCAGTGGACTGGCTCATCAGAAAAGCAAAACCTTCCATTGACAAGCTCGCCGAGCTTTCTTCGTGGCAACCGATCGGCGAAACTCAAACCCTAAACCCTCAAGAGGAAGAACAAAATGTTGCTGCACTCTCAACTGACATGGTTATGGGAGAATCATCAAATGCTTACAATTTTCATCTCTTAAGTCAATTGAGTGAGGATCAAGGTAACCCTAGTTCAGGTTTCATTTCACCGCATAACGTTGAAATTACTGATCCTATACCTTTCTTTCCAACTACCTCTTCTAATTCTTCATCCATCAATTTTCAGAACTACCCTTCTGAAAACCTTGGGCTCTCTCTTCATTCCTTCCAAGATCACAATGGTTTCATTCCTTGGCAATCACAACAACCATGTGAAAACCAAAACCAAAACCAAAACCATGACCAAACACTTTTTGATAATAACCAGTATCATGAAAATTGGAACAATGAAACAACTAATGATTATATACAGAAAGTAGGGTTCATGGTAAACTCAAATCCATTTCTAGGACAAGATTCAGATTACACTCCGAACGAGACACTTGAGTCGAATTTTTCGCAGTCAGTTCGATCTTGGAATGAAATTCCTATGGATTCTTCTTCGGAGGTTCATCAGAGATCACAACAAGTTCATCATCAAGCTTCAATCTTTGGAAGCAGGTTTGTTTCTGATGGATTACCAGGTTTCTGCATTCTTGATACAGTTCAAGATGGAGAAGAGGGTCATGGAGTTTCTTCTAATAAGCCTTCTTCTGTTTCCCCTAACAATAACTGA 990 0.4101 MRNTRGEIVQVEGGHIVRSSGKKDRHSKVYTSKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSRAVDWLIRKAKPSIDKLAELSSWQPIGETQTLNPQEEEQNVAALSTDMVMGESSNAYNFHLLSQLSEDQGNPSSGFISPHNVEITDPIPFFPTTSSNSSSINFQNYPSENLGLSLHSFQDHNGFIPWQSQQPCENQNQNQNHDQTLFDNNQYHENWNNETTNDYIQKVGFMVNSNPFLGQDSDYTPNETLESNFSQSVRSWNEIPMDSSSEVHQRSQQVHHQASIFGSRFVSDGLPGFCILDTVQDGEEGHGVSSNKPSSVSPNNN 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03382 329 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 17 281 IPR005333 GO:0003700
Vivi5g03382 329 MobiDBLite consensus disorder prediction 310 329 - -
Vivi5g03382 329 MobiDBLite consensus disorder prediction 312 329 - -
Vivi5g03382 329 ProSiteProfiles TCP domain profile. 22 80 IPR017887 -
Vivi5g03382 329 Pfam TCP family transcription factor 21 158 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03382 Vivi-Chr5 125114721 125115929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03382 6 185 TCP Transcription Factor Family AT2G31070 47.525 3.18e-47 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Vivi5g03382 TCP 2.5e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03382 - - vun:114168475 288.885