Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03378 ATGGCTCAATTGCCACCCAAAGTTCCAACTCCAAACATGACACAACCTTGGCCTGAATTTTCTCCTCATCAAAAAATGCCTAACCTTAAAGCTATTTCACCACTCAATGCTTCAAACTTTTCCAACAGTCAACAGAACCCTTCATGGGTGGACGAATTTCTCGACTTCTCGTCCACCAGACGGGGGGCTCACAGACGGTCGGCGAGTGATTCTGTGACTTTCATCGAGGCGTCAATGATGGAGCATTGTCGCGGTAGAGACGGGGGCAACGAGTTTGAAAGGTTTGATGATGAGCAACTGATGTCTATGTTTGGTGTGGATGAGGTTTCTGGGAAAAACATGATGCAGCCGCCAGCAAGAGCAGTAGCGGCTACATTGTCCTCTAACTCAAACCCTTCAACTCCTTCTGATAATAACAGCATCAACGATGAAAAAGAGGATGAGGAGGATGAAAAGCATCACCAACAGAAACAATTGAAGCATGAATCTGATGAGGATGAATTCGACGAATGCAAACAGGATATTGCACGAGTCGTCAATGATGATGAGGATGATACTAATGGGAACACAGCAACTTATTCAAGTCAGAAAATTACTGACCCCAAGAGGGTCAAAAGAATCTTGGCAAATAGACAATCTGCACAGAGATCAAGAGTGAGGAAACTGCAATACATATCAGAGCTTGAGAGAAGTGTGACTTCATTACAGGCAGAAGTATCAGTACTGTCACCACGAGTTGCATTTCTGGATCATCAGAGGTTGCTTCTAAATGTTGATAACAGTGCTCTCAAGCAAAGAATCGCAGCTCTTGCCCAAGACAAAATCTTCAAAGATGCTCATCAAGAGGCCCTGAAGAGGGAGATAGAGAGGCTGAGACAAGTGTATCACCAACAAAACATCAAGAATAATGCTACAACAGTAGTGTCACCATCTCCATCACCTAAACCACCTTGTGATAATGATACTCACATTGAAAATGAACATCTTATCAATGTCTGA 999 0.4344 MAQLPPKVPTPNMTQPWPEFSPHQKMPNLKAISPLNASNFSNSQQNPSWVDEFLDFSSTRRGAHRRSASDSVTFIEASMMEHCRGRDGGNEFERFDDEQLMSMFGVDEVSGKNMMQPPARAVAATLSSNSNPSTPSDNNSINDEKEDEEDEKHHQQKQLKHESDEDEFDECKQDIARVVNDDEDDTNGNTATYSSQKITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNIKNNATTVVSPSPSPKPPCDNDTHIENEHLINV 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03378 332 MobiDBLite consensus disorder prediction 1 47 - -
Vivi5g03378 332 PANTHER BASIC LEUCINE ZIPPER 34 1 308 - -
Vivi5g03378 332 CDD bZIP_plant_RF2 203 253 IPR044759 GO:0003700|GO:0006355
Vivi5g03378 332 MobiDBLite consensus disorder prediction 121 198 - -
Vivi5g03378 332 SMART brlzneu 198 262 IPR004827 GO:0003700|GO:0006355
Vivi5g03378 332 MobiDBLite consensus disorder prediction 122 139 - -
Vivi5g03378 332 Pfam bZIP transcription factor 202 246 IPR004827 GO:0003700|GO:0006355
Vivi5g03378 332 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 205 220 IPR004827 GO:0003700|GO:0006355
Vivi5g03378 332 Gene3D - 201 272 - -
Vivi5g03378 332 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 200 252 IPR004827 GO:0003700|GO:0006355
Vivi5g03378 332 MobiDBLite consensus disorder prediction 31 47 - -
Vivi5g03378 332 MobiDBLite consensus disorder prediction 301 332 - -
Vivi5g03378 332 SUPERFAMILY Leucine zipper domain 202 256 IPR046347 GO:0003700|GO:0006355
Vivi5g03378 332 Coils Coil 138 165 - -
Vivi5g03378 332 FunFam Basic leucine zipper 61 201 274 - -
Vivi5g03378 332 MobiDBLite consensus disorder prediction 1 16 - -
Vivi5g03378 332 MobiDBLite consensus disorder prediction 146 184 - -
Vivi5g03378 332 Coils Coil 281 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03378 Vivi-Chr5 125074523 125077437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03378 1 279 bZIP Transcription Factor Family AT3G58120 55.556 1.60e-88 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi5g03378 bZIP_2 4.2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03378 - - lang:109363232 395.586