Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03361 ATGATAATTGAGGAATCAAAACCAATGGGGTCTCAAAGCGAAGACCATCTTACAAAAATGCTTCAAGCTCAAACCAAGGTCTTCAATCACATTTTCAGTTTCATAAACTCAATGTCCCTTAAATGTGCAATTGAATTGAGTATACCAGATATCATACAAAACTATGGTCAACCTATCCCCCTTTCACAACTCATTGCTAAATTACCAATTCACCATTCCAAAACCGGTGACATACATCGTTTGATGCGAATTTTAACACATTCTGGTTTCTTCAACGCCATTGAAAATAATGACGTTGAAGAAGTAATGTATGAGCTTAATGATGCATCTAGATTATTGCTTAAGGATCATCCCTATAGTATGACATCTTTGTTACATCTTATACTTGGTCCAATTTTGAGTAAACCATGGCATCAACTTTCTAGTTGGTACAAAAATGATGACCTTTCACCTTTTCACACTGAAAACAATGGAGTTGCTTTTTGGGATTATGCTGGTGATGACCCTAAACATAATGAGTTGTTTAATGAAGCTATGGCTTGTGAAACTAGAATGGCTTGTAGTGTTGTGATGGGGAAGTTTAGAGAGGTGTTTGAAAAGATGGAATCATTGGTTGATGTTGGTGGAGGTGTAGGGACCATGTCTAAGGCTATTGCTAAGTCATTCCCAAATATTGATTGTGTTGTGTTTGATCTTCCACATGTTGTTGGTGGATTGCAAGGAAGTGAGAACTTGAAATATGTTGGAGGGGACATGTTTGAGGCTATTCCTCCTACTCATTCAATTTTACTCAAGGGTGTATTACATGATTGGAGCGATGAGAAATGTCTGAAAATACTAAAGAAATGCAAGGAAGCAATAATGAGCAATGGAAAAGTGATAATCATAGATGCAGTGATAGGGAGTGAGAAGGAAGAGAATGAAACAATTGAAGCACAGTTATTCTATGATTTGGAGATGATGGTGTTGGTTAATGGAAAAGAGAGAAATGAGAAAGAATGGTCTAACTTGTTTTTCTCCGCTGGTTTTAGTAACTACAAGATCACTCATGGTCTTGGTTTTAAGTCTCTCATTGAGGTTTTCCCATAG 1089 0.3691 MIIEESKPMGSQSEDHLTKMLQAQTKVFNHIFSFINSMSLKCAIELSIPDIIQNYGQPIPLSQLIAKLPIHHSKTGDIHRLMRILTHSGFFNAIENNDVEEVMYELNDASRLLLKDHPYSMTSLLHLILGPILSKPWHQLSSWYKNDDLSPFHTENNGVAFWDYAGDDPKHNELFNEAMACETRMACSVVMGKFREVFEKMESLVDVGGGVGTMSKAIAKSFPNIDCVVFDLPHVVGGLQGSENLKYVGGDMFEAIPPTHSILLKGVLHDWSDEKCLKILKKCKEAIMSNGKVIIIDAVIGSEKEENETIEAQLFYDLEMMVLVNGKERNEKEWSNLFFSAGFSNYKITHGLGFKSLIEVFP 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03361 362 Gene3D Vaccinia Virus protein VP39 114 362 IPR029063 -
Vivi5g03361 362 FunFam O-methyltransferase ZRP4 115 362 - -
Vivi5g03361 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 118 360 IPR029063 -
Vivi5g03361 362 Pfam Dimerisation domain 38 86 IPR012967 GO:0046983
Vivi5g03361 362 PIRSF O-mtase 4 362 IPR016461 GO:0008168
Vivi5g03361 362 Pfam O-methyltransferase domain 137 344 IPR001077 GO:0008171
Vivi5g03361 362 PANTHER O-METHYLTRANSFERASE 20 347 IPR016461 GO:0008168
Vivi5g03361 362 FunFam Coniferyl alcohol 9-O-methyltransferase 10 113 - -
Vivi5g03361 362 SUPERFAMILY "Winged helix" DNA-binding domain 19 118 IPR036390 -
Vivi5g03361 362 Gene3D - 9 113 IPR036388 -
Vivi5g03361 362 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 362 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03361 Vivi-Chr5 124810078 124812348 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03361 9 361 Monolignol Biosynthesis Gene Families AT5G54160 29.752 6.60e-49 167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03361 5 124810078 124812348 Vivi5g03361 5 124810078 124812348 ECH