LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi5g03358	ATGGCCTCAGAAACAGAACAAAGATCTCTTGAAGATACTCCAACATGGGCTGTCTCAATTTGTTGTTTCTTTGTCCTTGTTATATCTTTGATCATTGAAGGAGGTCTTCACAAATTCACTGAGGTTCTGAAGAAACAGAAAAGAAAGTCTATGGGGAAAGCTTTGGCTAAAACTAAAACAGAAATGATGAAATTTGGTTTTGTGTCATTTTTGCTGACAATATCGGAAGTGCCAATATCAAAAATCTGCATCAATAAGGATATGGCAAATTCGTTTCTACCATGTAAAGATTCTATGGAGAAGTTAGCAGTATCATCGGAATTAGATCAAATACCTTCTACCAATGAGTTGGGAAACCAAGTCAACTATTGTGAAGCTAAGGGCATGGTTAGTCTAATTTCAGATGATGGAGTCCTACAGCTAAATGTCTTAATCTCAATTTTGGCAGTCTTTCATATCCTTTACTGCACATTAACCATGTGTCTTGGAATGGCAAAGATGAGAAGATGGAAAAAATGGGAAGAGGAGACACAAACACTAGAATATCAGATAGATAATGATTCAAGAAGATTCCGGTATATAAGTCAGACATTAGGCGGCAAACGTCATCTTAAATTCTGGAATAATTATTCTCCCTTGCTTTGGATAGTCTGTTTTATGCGACAGTTCTATAATTCAGTCTCAAAAGATGATTACTTTGCGCTACGAAATGGGTTCATTGCAGCAAATATTTCTCAAGGCAGCAATTTCAATTTCAACTTCAAGAAATTTCTTTCGCGCACTTATGACGAGGATTTTGAAAAAATTGTTGGAATCAGGTTTTGGATCTGGCTTTTCTCCATCTTTTTCATATTCCTTAGTGCACATGAGTTTTATAATTACTACTGGCTTCCATTTATTCCACTTGTGATTTCTCTACTTGCTGGGACTAAACTACAAGTGATAATAACAAAGATGCATCTAGATAGTTGCAAAGAAAGTTCTGTGATCAAAGGAACCTTACTTGTAAAACCAAGTGATGAATATTTCTGGTTTCATCGACCGGAATGGCTTCTCCATATACTCCAAATCATCCTTATCCAGAACTCCTTTCAACTTGCATTTTTCACATGGACTTGGTATGAATTTGGTCCAAGGTCTTGCTTCAATAGAGAAATAGAAGATATTGCCATAAGGATTGTATTGGGTTTAGCTGTTCAGCTTCTTTGTGGTTATGTCACTCTTCCCCTTTATGCACTTGTCACTCAGATGGGGTCTAACATGAGAAAGGAGATTTTCACTGAGCATGTGACTCAAGGTCTAAAAAATTGGCATAAAAAGGCTAAGCGATCGCTATCGAAAAACAGCAACTCAGCTTCTTTACATTCCAAAACAAGTGAGAATTCAGTAAGGGGGTCATTTGAGGAGTTGCAGAATAATGAAGACATCATAACACCTAATTCAGGTAACAACTCTGGAAGTGGAGAGGAGGAAGAAGTAATTGTAGTTGCTGTTGAGAAGGAGATATCAAGTGAAACTACTTCTGAAGATAATGGTAAGGTCATCACCAGAGGAATCTATGACGGTGAGATCTCGTTTGGAATCTATGTGGGGAGTAGTAGCAGAGGTATAGGGGAAATTGTTTCAATAGCTGAAGAAGAAGAAGAATAG	1650	0.3727	MASETEQRSLEDTPTWAVSICCFFVLVISLIIEGGLHKFTEVLKKQKRKSMGKALAKTKTEMMKFGFVSFLLTISEVPISKICINKDMANSFLPCKDSMEKLAVSSELDQIPSTNELGNQVNYCEAKGMVSLISDDGVLQLNVLISILAVFHILYCTLTMCLGMAKMRRWKKWEEETQTLEYQIDNDSRRFRYISQTLGGKRHLKFWNNYSPLLWIVCFMRQFYNSVSKDDYFALRNGFIAANISQGSNFNFNFKKFLSRTYDEDFEKIVGIRFWIWLFSIFFIFLSAHEFYNYYWLPFIPLVISLLAGTKLQVIITKMHLDSCKESSVIKGTLLVKPSDEYFWFHRPEWLLHILQIILIQNSFQLAFFTWTWYEFGPRSCFNREIEDIAIRIVLGLAVQLLCGYVTLPLYALVTQMGSNMRKEIFTEHVTQGLKNWHKKAKRSLSKNSNSASLHSKTSENSVRGSFEELQNNEDIITPNSGNNSGSGEEEEVIVVAVEKEISSETTSEDNGKVITRGIYDGEISFGIYVGSSSRGIGEIVSIAEEEEE	549

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Vivi5g03358	549	MobiDBLite	consensus disorder prediction	444	491	-	-
Vivi5g03358	549	PANTHER	MLO-LIKE PROTEIN 1	6	480	IPR004326	GO:0006952\|GO:0016020
Vivi5g03358	549	MobiDBLite	consensus disorder prediction	446	488	-	-
Vivi5g03358	549	Pfam	Mlo family	7	460	IPR004326	GO:0006952\|GO:0016020

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi5g03358	Vivi-Chr5	124769297	124774475	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi5g03358	6	465	MLO family	AT2G39200	43.277	2.38e-149	439

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi5g03358	K08472		-	gmx:100789563	762.296

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vivi5g03358	5	124769297	124774475	Vivi5g03358	5	124769297	124774475	ECH

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