Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03273 ATGGGAGGTTATGAAGAAGAAGAAAACAAGTGGCCTTTATGGTTGCAACCACTTCTTCAAACGAGTTTCTTTGTTCAATGCAAAGTCCACTCAGATTCTCACAAGAGTGAATGTAACATGTTTTGCTTGGATTGTATTAATGGAGCCCTTTGTTCTGCTTGTCTTTCTTCTCACAAACAACACAGAACAATTCAGATAAGGAGATCTTCATACCATGATGTGATAAGGGTTTCTGAGATACAGAAATTTCTGGACATAACTGAAGTCCAAACTTATGTTATAAACAGTGCAAAGATTGTGTTTTTGAATGAAAGGCCTCAACCTAGGCCTGGAAAAGGGGTCACCAATACTTGCCAAGTCTGTGACAGAAGCCTCCTTGATTCCTTCAGCTTCTGCTCTCTTGGTTGTAAGATTGTTGGAACCTCCAAGAAGTTGAGGAAGAATAATGGGTCTGATGGTGAAGAGTCAATGAATGGCATTAGCAATGGAAGTGGAAGAAACAGAATTCATAGCTTTACACCTTCAACACCACCTCCAACAGTGGTGAGTTTCAGATCAGTTAAGAGGAGGAAAGGTGTTCCACATAGATCTCCAATGGGTGGAGGAATCATTATAGAATACTAA 624 0.4006 MGGYEEEENKWPLWLQPLLQTSFFVQCKVHSDSHKSECNMFCLDCINGALCSACLSSHKQHRTIQIRRSSYHDVIRVSEIQKFLDITEVQTYVINSAKIVFLNERPQPRPGKGVTNTCQVCDRSLLDSFSFCSLGCKIVGTSKKLRKNNGSDGEESMNGISNGSGRNRIHSFTPSTPPPTVVSFRSVKRRKGVPHRSPMGGGIIIEY 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03273 207 MobiDBLite consensus disorder prediction 152 182 - -
Vivi5g03273 207 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 199 - -
Vivi5g03273 207 MobiDBLite consensus disorder prediction 146 182 - -
Vivi5g03273 207 Pfam PLATZ transcription factor 67 138 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03273 Vivi-Chr5 123252198 123254346 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vivi5g03273 PLATZ 2.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03273 - - vvo:131607202 419.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03273 5 123252198 123254346 Vivi2g04098 2 154010165 154011667 ECH
Vivi5g03273 5 123252198 123254346 Vivi5g03273 5 123252198 123254346 ECH