Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03257 ATGGCTAGCCATGAATCTATGTGTCCAAAACCAATGAAGGCCACATCCAATGGGGCATTTCAACATGAAAACCCAATGGATTATGCACTTCCTTTGTTGATTGTTCAGATATGTTTGGTGGTTGCTTTTACGAGATTCATTGCATTTCTTTGCAAGCCTCTTAGACAACCTAGAGTTATTGCAGAAGTCATTGGAGGGATATTACTAGGACCATCAGCAATTGGGAGGAACAAGAGATTTCTAGAGATATTTTTTCCTGAAAGAAGCTTAACAGTTCTTGAAACAGTAGCCAACATTGGCCTTCTATTTTTCTTATTTCTAGTAGGTCTTGAACTTGACATGCGATCGATACGCAGAACAGGTACAAAAGCCTTATGCATAGCCCTTGCTGGGATCAGTGTCCCATTTGTACTTGGCATAGGCACTTCAGTTGTTCTTCGGGCCACGATATCCAAAGATGTTAATCCAGCTGCCTTCCTCGTCTTCATGGGCGTTTCTCTTTCGATTACCGCCTTTCCTGTCCTCGCTCGCATCCTAGCTGAGCTCAAACTCCTGACAACCGATGTCGGTCGTATGGCAATGTCAGCTGCTGCTGTCAATGATGTTGCTGCATGGATACTACTTGCTCTTGCCATTGCTCTTTCGGGATCAAACACTTCCCCTCTTGTTTCCTTGTGGGTCCTGCTATGTGGTGCGGGTTTCATCGTCTTTGTTGTTGTTGCTGTAAAGCCTTTATTTGCATTGATGGCCAAACATTCCCCTGAGGGTGAACCTGTGAGGGAGATTTACATTTGCATCACCTTGACAGTTGTTTTGGCTTGTAGTTTTATGACTGATACTATTGGTATTCATGCACTTTTCGGAGCTTTTGTAGCTGGAATTGTTGTTCCTAAAGATGGACCTTTCGCTGGCGTTTTGACCGAGAAGATTGAAGATCTTGTTATGAGTCTTTTGTTGCCACTTTATTTTGTGTCTAGTGGATTGAAGACTAATGTGGCTACTATAAGTGGAGGAATGTCTTGGTTACTATTACTCCTTGTTATATTTACTGCTTGCTTTGGCAAAATTGTTGGTACTCTTTCTGTGTCATTGTTGTGTAAAGTGCCTTTTAGAGAAGCATTGACCCTTGGATTTCTCATGAACACCAAGGGCTTGGTGGAACTTATTGTTCTTAACATCGGCAAGGATCGCAAGGTACTGAATGATCAAGCATTTGCAATATGTGTTTTAATGGCATTGTTCACCACTTTCATCACGACACCGATAGTGATGGCAGTATACAAACCTGCTAGGCATGGATCACCATACATGATTAAAACAGTTCAGCGCAAAGATCCAGACACAGAACTTCGAATACTAGCTTGCTTCCACAGCACATGGAACATTCCCACATTAGTCAATCTAATCGAATCTTCAAGAGGGACACGGAAGCGAGGAAGATTATGTATATACGCAATGCATTTAATGGAACTTTCAGAAAGACCTTCCGCGATAACAATGGTTCATAAGGCGAGAAACAATGGCCTGCCCTTCTGGAACAAAAAACAAGGCGACAACAACGATCAAATGGTTATTGCGTTTCAAGCTTACGGACATCTAACTAGCGTTAATGTCCGTCCAATGACAGCAATTTCGTCGTTGAATAACATCCACGAAGACATCTGTTCAAGTGCTCACCAAAAGCGGGTCGCAATGATTCTACTCCCGTTCCATAAGCACCAGCGTGCTGATGGAATGATGGAGTCACTAGGACAATCTTTCCGCATAATGAATGGCCTTGTACTCAGTCACGCTCCCTGCTCGGTTGGAATTTTGGTCGACCGCGGCCTTGGAGGGACAAGTCAAGTTCATGCTAGTGACGTTTCTTACAATGTCGTTGTACCTTTCTTTGGAGGATGCGACGATCGTGAAGCACTCGCATACGGAATGAGAATGGCTGAACATCCGGGGATTTATCTCACTGTCATCAAGTTCATTACTCCACCAGGAAAAACACTGGCATTCGGTGCTAAGCTGATCGGTGTAGCAGCTGACGAGAATCGAAAAGTAATAAAAGTGGCTGATGATAGCACAGACGACGAAGATAAAAAAGAGGATAACCAATTTTGGTCGGACTTTATAAGTGTTTCTTGTAAGAGCGAAGAGTCTATAGTATACGAGGAAAGGTTGGTGGATAGCAAAGACGATGTTATAACTGTATTGAGGGAAAGGAACAAAAGCAATCTGATTTGTGTAGGAAGAATGCCTCCAGTAGTACCTTTGCTAGATGGAAGTGATTGTGCTGAGCTTGGTCCTGTTGGAAGCTATTTGGCATCTTCTGATTTCTCTACAATTGCATCAGTCCTAGTTTTTCAGCAATATAATCCTAAGACAGATATTCATCCTTTGGTGATGGAGGTTTCTGATTATTCTGATATCCCTGACACACCAAGAGATAGAGATGAAGTATAG 2451 0.4276 MASHESMCPKPMKATSNGAFQHENPMDYALPLLIVQICLVVAFTRFIAFLCKPLRQPRVIAEVIGGILLGPSAIGRNKRFLEIFFPERSLTVLETVANIGLLFFLFLVGLELDMRSIRRTGTKALCIALAGISVPFVLGIGTSVVLRATISKDVNPAAFLVFMGVSLSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGSNTSPLVSLWVLLCGAGFIVFVVVAVKPLFALMAKHSPEGEPVREIYICITLTVVLACSFMTDTIGIHALFGAFVAGIVVPKDGPFAGVLTEKIEDLVMSLLLPLYFVSSGLKTNVATISGGMSWLLLLLVIFTACFGKIVGTLSVSLLCKVPFREALTLGFLMNTKGLVELIVLNIGKDRKVLNDQAFAICVLMALFTTFITTPIVMAVYKPARHGSPYMIKTVQRKDPDTELRILACFHSTWNIPTLVNLIESSRGTRKRGRLCIYAMHLMELSERPSAITMVHKARNNGLPFWNKKQGDNNDQMVIAFQAYGHLTSVNVRPMTAISSLNNIHEDICSSAHQKRVAMILLPFHKHQRADGMMESLGQSFRIMNGLVLSHAPCSVGILVDRGLGGTSQVHASDVSYNVVVPFFGGCDDREALAYGMRMAEHPGIYLTVIKFITPPGKTLAFGAKLIGVAADENRKVIKVADDSTDDEDKKEDNQFWSDFISVSCKSEESIVYEERLVDSKDDVITVLRERNKSNLICVGRMPPVVPLLDGSDCAELGPVGSYLASSDFSTIASVLVFQQYNPKTDIHPLVMEVSDYSDIPDTPRDRDEV 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03257 816 PANTHER CATION/H + ANTIPORTER 7 788 - -
Vivi5g03257 816 Pfam Sodium/hydrogen exchanger family 38 422 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vivi5g03257 816 Gene3D - 32 432 IPR038770 -
Vivi5g03257 816 FunFam Cation/H(+) antiporter 15 32 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03257 Vivi-Chr5 122875729 122879677 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03257 8 808 Antiporter Super Family AT3G17630 69.441 0.0 1091
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03257 K26731 - gmx:100818975 1298.11