Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03256 ATGATCAAACTTCCACCAGGACCTACTCCTCTTCCTTTTATAGGTAACCTCCATCAATTAGGAAAAAAGCCACACAAATCCTTAGCCAAATTAGCTCAAATTCATGGTCCAATCATGAGTCTAAAGCTAGGTCAAGTAACAACCATAGTTGCCTCTTCACCCAACATGGCCAAACAAATACTCCAAACACATGATAATATCTTATCTAACAGAACCATTCCAGATGCTGTAACAGTGCATGACCATCACAATTATAGCATGACATTCTTACCCGTTTCACCTCTTTGGAGAGACTTAAGAAAAATATGCAGTAATCAATTATTCTCTAACAAAACACTCGAAGAGAGTAAGGAAATCAGGCTTCAGAAACTTCAAGAATTACTCAATGATATTAGTCAAAGTAGTCTGGTTAATGAAGCTGTCGATATTGGAAATATGGCTTTTAAGACATCGATAAATATATTGTCAAACACTATTTACTCTTTAGATTTGGTTGAGTCTGCTGGTTCAGTTGGAGATTTCAAGGAGCTAGTTGTGAATATAATGGAAGAATGTGGAAAACCAAATATTGCTGATCTTTTTCCTGCACTTAGGATGTTTGACCCACTGGGTATTAAAGCTCGCACCTCTGCTTCTGCTGGGAAGATCCTTGATATCTTCCAACGTTTAGTTGATGAAAGATTGAAGTTGAGAGAAGTACAAGGTTTTGACACAAACAATGACATGCTAACTACCTTGCTCAATATTGCCCAGGACAACAGCCAAGTTATGAACAAAATCAAAATCAAACATTTACCTCTGACTTTATTTGTTGCGGGTACGGATACAATTTCATCTACAATAGAATGGGGGATGGCAGAATTACTCAAAAATGAAAATATTATGTCAAAAGCGAAACAAGAGTTAGAACAGATTATTGGCAAAGGAAAACCAGTTGAAGAATCAGATATTGCTAAGCTTCCTTATTTACAAGCAATAATAAAAGAGACATTTAGATTACACCCTCCAGTTCCATTTTTAATTCCTCGAAAAGCCAATGAAAATGTGGAAATTGATGGTTACAGAATCCCAAAAGATGCACAAATTTGGGTCAATGTGTGGGCTATTGGTAGAAGTTCAAGTGTTTGGGAAAATGCAAGTTTGTTTTCACCAGAGAGATTCTTAAAATCTGAAATTGATACTAAAGGTCATAATTTCGAGCTTACGCCATTTGGGGCTGGAAGGAGAATTTGTCCTGGTTTGTTGTTAGCTACAAAGGAGTTGTATTTGATGTTGGGTTCATTAATCAATTGTTTTAATTGGAAATTTGAAGATGGGACGGAAATTGATGATATGAACATGGAGGATAAATTTGGAATCACATTAGCGAAGGCTCAACCACTAAGAGTCATTCCAGAAAAAGTATGCAACTAG 1413 0.3638 MIKLPPGPTPLPFIGNLHQLGKKPHKSLAKLAQIHGPIMSLKLGQVTTIVASSPNMAKQILQTHDNILSNRTIPDAVTVHDHHNYSMTFLPVSPLWRDLRKICSNQLFSNKTLEESKEIRLQKLQELLNDISQSSLVNEAVDIGNMAFKTSINILSNTIYSLDLVESAGSVGDFKELVVNIMEECGKPNIADLFPALRMFDPLGIKARTSASAGKILDIFQRLVDERLKLREVQGFDTNNDMLTTLLNIAQDNSQVMNKIKIKHLPLTLFVAGTDTISSTIEWGMAELLKNENIMSKAKQELEQIIGKGKPVEESDIAKLPYLQAIIKETFRLHPPVPFLIPRKANENVEIDGYRIPKDAQIWVNVWAIGRSSSVWENASLFSPERFLKSEIDTKGHNFELTPFGAGRRICPGLLLATKELYLMLGSLINCFNWKFEDGTEIDDMNMEDKFGITLAKAQPLRVIPEKVCN 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03256 470 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 3 467 - -
Vivi5g03256 470 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 404 413 IPR017972 GO:0005506|GO:0016705
Vivi5g03256 470 FunFam Cytochrome P450 76C4 1 464 - -
Vivi5g03256 470 PRINTS P450 superfamily signature 411 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03256 470 PRINTS P450 superfamily signature 325 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03256 470 PRINTS P450 superfamily signature 272 289 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03256 470 PRINTS P450 superfamily signature 402 411 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03256 470 Gene3D Cytochrome P450 1 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03256 470 Pfam Cytochrome P450 5 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03256 470 CDD CYP76-like 32 465 - -
Vivi5g03256 470 PRINTS E-class P450 group I signature 411 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03256 470 PRINTS E-class P450 group I signature 365 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03256 470 PRINTS E-class P450 group I signature 281 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03256 470 PRINTS E-class P450 group I signature 401 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03256 470 PRINTS E-class P450 group I signature 32 51 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03256 470 PRINTS E-class P450 group I signature 261 278 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03256 470 PRINTS E-class P450 group I signature 324 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03256 470 SUPERFAMILY Cytochrome P450 5 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03256 Vivi-Chr5 122854488 122856130 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03256 4 467 Cytochrome P450 AT2G45550 45.416 3.56e-152 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03256 - - vvo:131607027 780.015