Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03255 ATGAAGGCCACATCCAATGGGGCATTTCAACATGAAAACCCAATGGATTATGCTCTTCCTTTGTTGATTGTTCAGATATGTTTGGTGGTTGCTTTTACGAGATTCATTGCATTTCTTTGCAAGCCTCTTAGACAACCTAGAGTTATTGCAGAAGTCATTGGAGGGATATTACTAGGACCATCAGCAATTGGGAGGAACAAGAGATTTCTAGAGATATTTTTTCCTGAAAGAAGCTTAACAGTTCTTGAAACAGTAGCCAACATTGGCCTTCTATTTTTCTTATTTCTAGTAGGTCTTGAACTCGACATGCGATCGATACGCAGAACAGGTACAAAAGCCTTATGCATAGCCCTTGCTGGGATCAGTGTCCCATTTGTACTTGGCATAGGCACTTCAGTTGTTCTTCGCGCCACCATATCCAAAGACGTTAATCCAGCTGCCTTCCTCGTCTTCATGGGCGTTTCTCTTTCGATTACCGCCTTTCCTGTCCTCGCTCGCATCCTAGCTGAGCTCAAACTCCTGACAACCGATGTGGGTCGTATGGCAATGTCGGCTGCTGCTGTCAACGATGTTGCAGCATGGATACTACTTGCTCTTGCCATTGCTCTTTCGGGATCAAACACTTCCCCTCTTGTTTCCTTGTGGGTCCTGCTCTGTGGTGCGGGTTTTATCGTCTTTGTTGTTGTTGCTGTAAAGCCTTTATTTGCATTGATGGCTAAACATTCCCCTGAGGGTGAACCTGTGAGGGAGATTTACATTTGCATCACCTTGACAGTTGTTTTGGCTTGTAGTTTTATGACTGATACTATTGGTATTCATGCACTTTTCGGAGCTTTTGTAGCTGGAATTGTTGTTCCTAAAGATGGACCTTTCGCTGGCGTTTTGACCGAGAAGATTGAAGATCTTGTTATGAGTCTTTTGTTGCCACTTTATTTTGTGTCTAGTGGATTGAAGACTAATGTGGCTACTATAAGTGGAGGAATGTCTTGGTTACTATTACTCCTTGTTATATTTACTGCTTGCTTTGGTAAAATTGTTGGTACTCTTTCTGTGTCATTGTTGTGTAAAGTGCCTTTTAGAGAAGCATTGACCCTTGGATTTCTTATGAACACCAAGGGCTTGGTGGAACTTATTGTTCTCAACATCGGCAAGGATCGCAAGGTACTGAATGATCAAGCATTTGCAATATGTGTTTTAATGGCATTGTTCACCACTTTCATCACGACACCGATAGTGATGGCAGTATACAAACCTGCTAGGCATGGATCACCATACATGATTAAAACAGTTCAGCGCAAAGATCCAGACACAGAACTTCGAATACTAGCTTGCTTCCACAGCACATGGAACATTCCCACATTAGTCAATCTAATCGAGTCTTCAAGAGGGACACGGAAGCGAGGAAGATTATGTATATACGCAATGCATTTAATGGAACTCTCAGAAAGACCTTCCGCGATAACAATGGTTCATAAGGCGAGAAACAATGGCCTTCCCTTCTGGAACAAAAAACAAGGCGATAACAATGATCAAATGGTTATTGCGTTCCAAGCTTACGGACATCTAACTAGCGTTAATGTCCGTCCAATGACAGCAATTTCGTCGTTGAATAACATCCACGAAGACATCTGTTCAAGTGCTCACCAAAAGCGGGTCGCAATGATTCTACTCCCGTTCCATAAGCATCAACGTGCTGATGGAATGATGGAGTCACTAGGCCAATCTTTCCGCATAATGAATGGCCTTGTACTCAGTCACGCTCCCTGCTCGGTTGGAATTTTGGTCGACCGCGGCCTTGGAGGAACAAGCCAAGTTCATGCTAGTGACGTTTCTTACAATGTTGTTGTACCATTCTTTGGAGGATGCGACGATCGTGAAGCACTCGCATACGGAATGAGAATGGCTGAACATCCGGGGATTTATCTCACTGTCATCAAGTTCATTACTCCACCAGGAAAAACACTGGCATTCGGTGCTAAGCTGATCGGTGTAGCAGCTGACGAGAATCGAAAAGTAATCAAAGTTGCTGATGATAGCACAGACGACGAAGATAAAAAAGAGGATAATCAATTTTGGTCGGACTTTATAAGTGTTTCTTGTAAGAGCGAAGAGTCTATAGTATACGAGGAAAGGTTGGTGGATAGCAAAGACGATGTTATAACTGTATTGAGGGAAAGGAACAAAAGCAATCTGATTTGTGTAGGAAGAATGCCTCCAGTAGTACCTTTGCTAGATGGAAGTGATTGTGCTGAGCTTGGTCCTGTTGGAAGCTATTTGGCCTCTTCTGATTTCTCTACAATTGCATCAGTCCTAGTTTTTCAGCAATATAATCCTAAGACAGATATTCATCCTTTGGTGATGGAGGTTTCTGATTATTCTGATATCCCTGACACACCAAGAGATAGAGATGAAGTATAG 2418 0.4276 MKATSNGAFQHENPMDYALPLLIVQICLVVAFTRFIAFLCKPLRQPRVIAEVIGGILLGPSAIGRNKRFLEIFFPERSLTVLETVANIGLLFFLFLVGLELDMRSIRRTGTKALCIALAGISVPFVLGIGTSVVLRATISKDVNPAAFLVFMGVSLSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGSNTSPLVSLWVLLCGAGFIVFVVVAVKPLFALMAKHSPEGEPVREIYICITLTVVLACSFMTDTIGIHALFGAFVAGIVVPKDGPFAGVLTEKIEDLVMSLLLPLYFVSSGLKTNVATISGGMSWLLLLLVIFTACFGKIVGTLSVSLLCKVPFREALTLGFLMNTKGLVELIVLNIGKDRKVLNDQAFAICVLMALFTTFITTPIVMAVYKPARHGSPYMIKTVQRKDPDTELRILACFHSTWNIPTLVNLIESSRGTRKRGRLCIYAMHLMELSERPSAITMVHKARNNGLPFWNKKQGDNNDQMVIAFQAYGHLTSVNVRPMTAISSLNNIHEDICSSAHQKRVAMILLPFHKHQRADGMMESLGQSFRIMNGLVLSHAPCSVGILVDRGLGGTSQVHASDVSYNVVVPFFGGCDDREALAYGMRMAEHPGIYLTVIKFITPPGKTLAFGAKLIGVAADENRKVIKVADDSTDDEDKKEDNQFWSDFISVSCKSEESIVYEERLVDSKDDVITVLRERNKSNLICVGRMPPVVPLLDGSDCAELGPVGSYLASSDFSTIASVLVFQQYNPKTDIHPLVMEVSDYSDIPDTPRDRDEV 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03255 805 PANTHER CATION/H + ANTIPORTER 1 777 - -
Vivi5g03255 805 Pfam Sodium/hydrogen exchanger family 27 411 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vivi5g03255 805 Gene3D - 21 421 IPR038770 -
Vivi5g03255 805 FunFam Cation/H(+) antiporter 15 21 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03255 Vivi-Chr5 122741080 122744674 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03255 1 797 Antiporter Super Family AT3G17630 69.413 0.0 1083
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03255 K26731 - gmx:100818975 1283.47