Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03254 ATGGAGTGTTTGCTAGGTAGTGTGATCTTCCTATTTCTATTACCATTCACTCTCTATTTTCTACTTTCTAAATGCACAAAAAATAACTCAAACATGATCAAACTTCCACCAGGACCTAGTCCTCTTCCTTTTATAGGTAACCTCCATCAATTAGGAAAAAAGCCACACAAATCATTAGCCAAGTTAGCTGAAATTCATGGTCCACTCATGACTCTAAAGTTAGGCCAAGTAACAACCATAGTTGCCTCTTCACCCTACATGGCCAAACAAATACTCCAAACACATGATCATGATTTATCTAACAGAACCATTCCAGATGCTGTAACAGTGCATGACCATCACAATTATAGCATGACATTCTTTCCCGTTTCACCTCTTTGGAGAGACTTAAGAAAAATATGCAGTAATCAATTATTCTCTAACAAAACACTCGAAGAGAGTAAGGAAATCAGGCTTCAGAAACTTCAAGAATTACTCAATGATATTAGTCAAAGTAGTCTTGTTAATGAAGCTATCGATATTGGAAATATGGCTTTTAAGACATCGATTAATATATTGTCAAACACTATTTACTCTTTAGATTTGGTTGAGTCTGCTGGTTCAGTTGGAGATTTCAAGGAGCTCGTTGTGAATATAATGGAAGAATGTGGAAAACCAAACATTGTTGATCTTTTTCCTGCACTTAGGATGTTTGACCCACAAGGTATCAAAGCTCGCACCTCTGCTTCTGCTGGGAAGATCCTTGATATCTTCCAACGTTTAGTTGATGAAAGATTGAAGCTGAGGGAAGTACAAGGTTTTGACACAAACAATGACATGCTAAGTAACTTGCTTAACATTGCTCAAGACAACAGCCAAGAAATGAACATTGCCAAAATCCCACATGTATCTCTGACTTTATTTGTTGCGGGTACGGATACAATTTCATCTACAATAGAATGGGCGATGGCAGAATTGCTCAAAAATGAAAATATTATGTCAAAAGCGAAACAAGAGTTGGAACAGATTATTGGCAAAGGAAAACCAGTTGAAGAATCAGATATTGCTAAGCTTCCTTATTTACAAGCAATAATAAAAGAGACATTTCGATTACACCCTCCTGTTCCATTTTTAATTCCTCGAAAAGCCAATGAAAATGTGGAAATTGGTGGTTACACAATCCCAAAAGATGCACAAATTTGGGTGAATGTGTGGGCTATTGGTAGAAGTTCAAGTGTTTGGGAAAATGCAAGTTTGTTTTCACCAGAGAGATTCTTAAAATCTGAAATTGATATTAAAGGTCATAATTTCGAGCTTACGCCATTTGGGGCTGGAAGGAGAATTTGTCCTGGTTTGTTGTTAGCTACAAAGGAGTTGTATTTGATGTTGGGTTCATTAATCAATTGTTTTAATTGGATATTTGAAGATGAGACGAAAATTGATGATATGAACATGGAGGATAAATTTGGAATCACATTAGCGAAGGCTCAACCACTAAGAGTCATTCCAGAAAAAGTATGCAACTAG 1506 0.3645 MECLLGSVIFLFLLPFTLYFLLSKCTKNNSNMIKLPPGPSPLPFIGNLHQLGKKPHKSLAKLAEIHGPLMTLKLGQVTTIVASSPYMAKQILQTHDHDLSNRTIPDAVTVHDHHNYSMTFFPVSPLWRDLRKICSNQLFSNKTLEESKEIRLQKLQELLNDISQSSLVNEAIDIGNMAFKTSINILSNTIYSLDLVESAGSVGDFKELVVNIMEECGKPNIVDLFPALRMFDPQGIKARTSASAGKILDIFQRLVDERLKLREVQGFDTNNDMLSNLLNIAQDNSQEMNIAKIPHVSLTLFVAGTDTISSTIEWAMAELLKNENIMSKAKQELEQIIGKGKPVEESDIAKLPYLQAIIKETFRLHPPVPFLIPRKANENVEIGGYTIPKDAQIWVNVWAIGRSSSVWENASLFSPERFLKSEIDIKGHNFELTPFGAGRRICPGLLLATKELYLMLGSLINCFNWIFEDETKIDDMNMEDKFGITLAKAQPLRVIPEKVCN 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03254 501 CDD CYP76-like 63 496 - -
Vivi5g03254 501 FunFam Cytochrome P450 76C4 27 495 - -
Vivi5g03254 501 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03254 501 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03254 501 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03254 501 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03254 501 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03254 501 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03254 501 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03254 501 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03254 501 Pfam Cytochrome P450 36 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03254 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Vivi5g03254 501 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03254 501 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03254 501 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03254 501 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03254 501 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 14 498 - -
Vivi5g03254 501 Gene3D Cytochrome P450 20 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03254 501 SUPERFAMILY Cytochrome P450 36 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03254 Vivi-Chr5 122728634 122730544 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03254 1 498 Cytochrome P450 AT2G45550 42.292 1.66e-151 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03254 - - vvo:131607027 826.624