Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03250 ATGGAGTTTTTACTAAGTTCTATGATCCTCTTATTTCTATTCCCATTCACTCTCTATTTTCTACTTTCTAAATGCACTAAAAACATTATCAAACTTCCACCAGGACCTACTCCTCTTCCTTTTATAGGAAACCTCCATCAATTAGGAAAAAAGCCACACAAATCCTTAGCCAAATTAGCTGAAACTCATGGTCCACTCATGACTCTAAAGTTAGGCCAAGTAACAACCATAGTTGTATCTTCACCCAACATGGCCAAAGAAGTACTCCAAACACATGATCATATCTTATCCAACAGAACCGTTCCCGGTGCTGTAAAAGTTCATGACCACGACAAATACAACATGGCGTTCTTACCAATTGCACCTCTTTGGAGAGAGTTAAGAAAAATTTGCAATAATGAATTATTTTCTAATAAAACACTTGATGAGAGTAAGGGAACGAGGCTTCAGAAACTGGAAGATTGTCTCAATGATATTAATCAAAACTTGGTTCAATCATCTGATTCGGTCGGAGATTTCAAGGAGCTAATTTTGAATATATTGAAAGAGTGTGGAAAACCAAACATTGCTGATCTTTTTCCCGCGTTAAATATTTTTAACTTTGATCTACAAGGTATTAAACGACGCAACGCTGTTTATGCTCAGAAGGTTTTTGATATCTTCCGGCGTTTAATTGATCAAAGAGTGAAGCTGAGGGAAGTACAACGTTTTGACACAAAAAGTGACATGCTAAGTAACTTGCTCGACATTGCTGAAGACAACAGCCAAGAGATGAACAAGGCCAAAATCCCACACTTATCTCTGACTTTATTTATTGCGGGTACGGATACAATTTCATCTACACTTGAATGGGCAATGTCAGAATTGGTCAAAAATGAAAAGATTATGACAAAAGCAAAACAAGAGCTAGAACAAATCATTGGCAAAGGAAAACCAGTTGAAGAAACAGATATTGTTAAGCTTCCTTATTTACAAGCAATAATAAAAGAGACGTTTAGATTACACCCTGCGGTTCCATTTTTAGTCCCTCGAAAAGCTGATGCAAATGTGGAAATTGATGGCTACACAATTCCAAAAGATGCACAAATTTGGGTCAATGTGTGGGCTATTGGTAGAAATTCAAGTACTTGGGAAAATGCAAATTTGTTTTCACCAGAGAGATTCTTAGAATCTAAAATTGATGCTATAGGTCACAATTTCGAGCTTTTACCATTTGGCGCGGGAAGAAGAATTTGTCCTGGTATATCATTAGCTACAAAGATGTTACCTTTGATGTTGGGTTCATTTATCAATTGTTTTAACTGGAAATTAGAAGATGGAATGAAAGTAGAAGATATGAACATGGAGGACAAGTTTGGACTATCATTAGAAAAGTCTCAGCCGCTAAGAGTTGTTCCAGAAAAAGTATGCAACTAG 1416 0.3651 MEFLLSSMILLFLFPFTLYFLLSKCTKNIIKLPPGPTPLPFIGNLHQLGKKPHKSLAKLAETHGPLMTLKLGQVTTIVVSSPNMAKEVLQTHDHILSNRTVPGAVKVHDHDKYNMAFLPIAPLWRELRKICNNELFSNKTLDESKGTRLQKLEDCLNDINQNLVQSSDSVGDFKELILNILKECGKPNIADLFPALNIFNFDLQGIKRRNAVYAQKVFDIFRRLIDQRVKLREVQRFDTKSDMLSNLLDIAEDNSQEMNKAKIPHLSLTLFIAGTDTISSTLEWAMSELVKNEKIMTKAKQELEQIIGKGKPVEETDIVKLPYLQAIIKETFRLHPAVPFLVPRKADANVEIDGYTIPKDAQIWVNVWAIGRNSSTWENANLFSPERFLESKIDAIGHNFELLPFGAGRRICPGISLATKMLPLMLGSFINCFNWKLEDGMKVEDMNMEDKFGLSLEKSQPLRVVPEKVCN 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03250 471 PRINTS E-class P450 group I signature 282 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03250 471 PRINTS E-class P450 group I signature 412 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03250 471 PRINTS E-class P450 group I signature 402 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03250 471 PRINTS E-class P450 group I signature 325 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03250 471 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03250 471 PRINTS E-class P450 group I signature 262 279 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03250 471 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03250 471 PRINTS E-class P450 group I signature 366 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03250 471 FunFam Cytochrome P450 76C4 161 465 - -
Vivi5g03250 471 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 405 414 IPR017972 GO:0005506|GO:0016705
Vivi5g03250 471 PRINTS P450 superfamily signature 273 290 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03250 471 PRINTS P450 superfamily signature 412 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03250 471 PRINTS P450 superfamily signature 403 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03250 471 PRINTS P450 superfamily signature 326 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03250 471 SUPERFAMILY Cytochrome P450 33 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03250 471 CDD CYP76-like 60 466 - -
Vivi5g03250 471 Gene3D Cytochrome P450 22 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03250 471 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 161 468 - -
Vivi5g03250 471 Pfam Cytochrome P450 33 180 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03250 471 Pfam Cytochrome P450 173 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03250 Vivi-Chr5 122676769 122680800 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03250 13 468 Cytochrome P450 AT2G45570 42.369 6.96e-136 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03250 - - vvo:131607027 829.32