Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03246 ATGGAGTTTTTGCTAAGTTCTATCATCCTCCTATTTCTATTACCATTCACTCTCTATTTTCTTATTTCTAAATGCACTAAAAACATTATCAAACTTCCACCAGGACCTACTCCTCTTCCTTTTATAGGAAACCTCCATCAATTAGGAAAAAAGCCACACAAATCCTTAGCCAAATTAGCTCAAATTCATGGTCCAATCATGAGTCTAAAGCTAGGTCAAGTAACAACCATAGTTGTATCTTCACCCAACATGGCCAAACAAATACTCCAAACACATGATAATCTCTTATCTAACAGAACCGTTCCCGGTGCTGTAAAAGTTCATGACCACCACAAATACAACATTGCATTCTTACCAATTGCACCTCTTTGGAGAGAGTTAAGAAAACTATGCAATAATCAATTATTCTCTAACAAAACACTCGATGAGAGTAAGGGAATCAGGCTTCAGAAACTGAATGATTGTCTCAACGATATTAACCAAAGTAGTCTTGTTAACGAAGCTGTTAATATTGGAGATATGGTTTTCAAGACATCCATTAATTTGTTGTCAAACACTATTTTCTCTGTTGATTTGGTTCAACCTGGTGAATCAGTTGGAGATTTCAAGGAGCTAATTGTGAATATATTGAAAGAGTGTGGAAAACCAAACATTGCTGACCTTTTTCCTGCGTTAAATATGTTTGACTTTGATCTACAAGGTATTAAACGCCGTAACGCTGTTCATGCTCAGAAGGTTTTTGATATCTTCCAACGTTTAATTGATGAAAGATTGAAGCTGAGGGAAGTACAAGGTTTTGACACAAACAATGACATGCTAAGTAAGTTGCTCAACATTGCTCAAGACAACAGCCAAGAAATGAGCATTGCCAAAATCACACATTTATCTCTGACTTTATTTATTGCTGGTACGGAGACAATTTCAGCTACTCTAGAATGGGCAATGGCAGAATTGCTCAAAAATGAAAAGCTTATGTCAAAAGCAAAACAAGAGTTGGAACAAATCATTGGCAAAGGAAAACCAGTTGAAGATTCAGATATTGTTAAGCTTCCTTATTTACAAGCAATATTAAAAGAGACATTTAGATTACACCCTTCCGTTCCATTTTTACTTCCTCGAAAAGCCAATGCAAATGTGGAAATTGATGGCTACACAATCCCAAAAGATGCACAAATTTGGGTCAATGTGTGGGCTATTGGTAGAAATTCAAGTGTTTGGGAAAATGCAAATTTGTTTTCACCAGAGAGATTCTTAAATTCTGAAATTGATGCTAAAGGTCACAATTTCGAGCTTCTACCATTTGGTGCTGGAAGGAGAATTTGTCCTGGTATACCGTTAGCGACAAAGATGTTACATTTGATGTTGGGTTCATTTATCAATTGTTTTAACTGGAAATTAGAAGATGGAATGAAAATACAAGATATGAACATGGAGGACAAGTTTGGACTATCATTAGAAAAGTCTCAGCCGCTAAGAGTTGTTCCCGAAAGAATATGCAATTAG 1503 0.3599 MEFLLSSIILLFLLPFTLYFLISKCTKNIIKLPPGPTPLPFIGNLHQLGKKPHKSLAKLAQIHGPIMSLKLGQVTTIVVSSPNMAKQILQTHDNLLSNRTVPGAVKVHDHHKYNIAFLPIAPLWRELRKLCNNQLFSNKTLDESKGIRLQKLNDCLNDINQSSLVNEAVNIGDMVFKTSINLLSNTIFSVDLVQPGESVGDFKELIVNILKECGKPNIADLFPALNMFDFDLQGIKRRNAVHAQKVFDIFQRLIDERLKLREVQGFDTNNDMLSKLLNIAQDNSQEMSIAKITHLSLTLFIAGTETISATLEWAMAELLKNEKLMSKAKQELEQIIGKGKPVEDSDIVKLPYLQAILKETFRLHPSVPFLLPRKANANVEIDGYTIPKDAQIWVNVWAIGRNSSVWENANLFSPERFLNSEIDAKGHNFELLPFGAGRRICPGIPLATKMLHLMLGSFINCFNWKLEDGMKIQDMNMEDKFGLSLEKSQPLRVVPERICN 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03246 500 FunFam Cytochrome P450 76C4 24 494 - -
Vivi5g03246 500 Pfam Cytochrome P450 33 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03246 500 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 11 496 - -
Vivi5g03246 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Vivi5g03246 500 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03246 500 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03246 500 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03246 500 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03246 500 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03246 500 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03246 500 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03246 500 SUPERFAMILY Cytochrome P450 33 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03246 500 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03246 500 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03246 500 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03246 500 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03246 500 Gene3D Cytochrome P450 21 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03246 500 CDD CYP76-like 60 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03246 Vivi-Chr5 122605567 122607308 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03246 1 495 Cytochrome P450 AT2G45550 41.107 8.82e-150 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03246 - - vvo:131607027 935.636