Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03242 ATGGAGTTTTTGCTAAGTTATTTGTTCCTCTCATTTCTATTAGCATTCACTCTCTATTTTCTACTTTCTAAATGCACTAAAAACAACTCAAACATGATTAAACTTCCACCAGGGCCTACACCTCTTCCTCTTATAGGAAACCTCCATCAATTAGGAAAAAGCCCTCACAAATCCTTAGCCAAATTAGCTGAAATTCATGGTCCACTCATGACTCTAAAGTTAGGCCAAGTAACAACCATAGTTGTATCTTCACCCAACATGGCCAAACAAATACTCCAAACACATGATAATATCTTATCTAACAGAGCCATTCCCGGTGCTGTAAAAGTTCATGACCACCATAAATACAACATGGCGTTCATACCAATTGCACCTCTTTGGAGAGAGTTAAGAAAAATATGCAATAATCAATTATTCTCTAACAAAACACTTGATGAGAGTAAGGGAATCAGGCTTCAGAAACTGAAAGACTGTCTCAATGATATTAATCAAAGTAGTCTTATGAATGAAGCTGTTAATATTGGAGATATGGTTTTCAAGACATCCATTAATTTGTTGTCAAACACCATTTTCTCCGTAGATTTGGTTCAATCATCTGATTCAGTTGGAGATTTCAAGGAGCTAATCTTGAATATATTGAAAGAGTGTGGAAAACCAAACATTGCGGATCTTTTTCCTGCTTTAAATATGTTTGACTTTGATCTACAGGGTATTAAACGACGTAACGCTGTTCATGCTCAGAAAGTCTTTGATATCTTCCAACGGTTAATTGATGAAAGATTGAAGCTGAGGGAAGAACAAGGTTTTGATACAAAAAGTGACATGCTAAGAACCTTGCTCGACATTGCTGAAGACCACAGCCAAGAGATGAGCATTGCCAAAATCCCACATTTATCTCTGACTTTATTTATTGCTGGTACGGACACAATTTCATCTACTTTAGAATGGGCAATGTCAGAATTGGTCAAAAATGAAAAGATTATGACAAAAGCAAAACAAGAGTTGGAACAAATCATTGGCAAAGGAAAACCAATTGAAGATTCAGATATTGCGAAGCTTCCTTATTTACAAGCAATAATAAAAGAGACATTTAGATTACACCCTTCCGTTCCATTTTTAGTCCCTCGAAAAGCCAATGCAAATGTTGAAATTGATGGCTACACAATTCCAAAAGATGCACAAATTTGGGTGAATGTGTGGGCTATTGGTAGAAATTCAAGTGTTTGGGAAAATGAAAATTTGTTTTCACCAGAGAGATTCTTAAATTCTGACATTGATTCTAAAGGTCACAATTTCGAGCTTCTACCATTTGGCGCTGGAAGGAGAATTTGTCCTGGATTGTCGTTGGCTACAAAGATGTTACATTTGATGTTGGGTTCATTTATCAATTGTTTTGACTGGAAATTAGAAGATGGAATGAAAACAGAAGATATGAACATGGAGGAAAAGTTTGGACTATCATTAGAGAAGTCTCAGCCACTGAGAGTTGTTCCAGAAAAAGTATGCAACTAG 1512 0.3611 MEFLLSYLFLSFLLAFTLYFLLSKCTKNNSNMIKLPPGPTPLPLIGNLHQLGKSPHKSLAKLAEIHGPLMTLKLGQVTTIVVSSPNMAKQILQTHDNILSNRAIPGAVKVHDHHKYNMAFIPIAPLWRELRKICNNQLFSNKTLDESKGIRLQKLKDCLNDINQSSLMNEAVNIGDMVFKTSINLLSNTIFSVDLVQSSDSVGDFKELILNILKECGKPNIADLFPALNMFDFDLQGIKRRNAVHAQKVFDIFQRLIDERLKLREEQGFDTKSDMLRTLLDIAEDHSQEMSIAKIPHLSLTLFIAGTDTISSTLEWAMSELVKNEKIMTKAKQELEQIIGKGKPIEDSDIAKLPYLQAIIKETFRLHPSVPFLVPRKANANVEIDGYTIPKDAQIWVNVWAIGRNSSVWENENLFSPERFLNSDIDSKGHNFELLPFGAGRRICPGLSLATKMLHLMLGSFINCFDWKLEDGMKTEDMNMEEKFGLSLEKSQPLRVVPEKVCN 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03242 503 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03242 503 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03242 503 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03242 503 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03242 503 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 12 500 - -
Vivi5g03242 503 CDD CYP76-like 63 498 - -
Vivi5g03242 503 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03242 503 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03242 503 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03242 503 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03242 503 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03242 503 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03242 503 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03242 503 SUPERFAMILY Cytochrome P450 36 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03242 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Vivi5g03242 503 Gene3D Cytochrome P450 20 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03242 503 FunFam Cytochrome P450 76C4 27 497 - -
Vivi5g03242 503 Pfam Cytochrome P450 36 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03242 Vivi-Chr5 122501617 122503579 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03242 7 500 Cytochrome P450 AT2G45550 41.683 4.10e-152 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03242 - - vvo:131607027 909.057