Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03208 ATGGAAGAAACAAAATGGATGATGCCCACTTCACTCTTCCTCCTAACTTTCCTCATCCTTTTGAAATTGATTCAAAAGAAACAATCCAACCACAAAAACCTTCCTCCTTCTCCGCCATCTTTACCACTCATAGGCCACCTCCATCTCATCAAACAACCCTTACATCGAAGTCTCCACAACCTCACAAAAACCTACGGCCACATCTTCTTCCTCCACGTCGGAACCCGCAAGATCCTTGTCGTCTCTTCACCTTCCGCAGTAGAAGAATGTTTGTCAAACAATGACATAACATTCGCAAATCGCTCCGTAACACTTGCTGGAAAATATCTCAATTACAATAACACAACATTAGGGTTTTCTTCTTACGGCAAACTCTGGCGCAAACTACGTCGTTTAACAACTACGGAGCTTTTCTCTTCCAATCGTCTTGCCATGTTCACGAAAGTTCGAGAAGATGAAGTGAAATTGTTGATTAAGCAAATATTTGAAGGGTGCAAAGGCGAAATAATGTCAAAAGTTGATCTCAAAACAAAAACTTTAGAGCTTTCTTTCAACATCATGTTGAGAGTGATATCTGGGAAGCGATACTATGGTGAAGATGATGATGTTGCCATAGGAGGAAAAGAGTTTCAAATTTTGATGAATGAATATATAGAGCTTCTTGGAAGTGGGAATTTGAATGATTTTTTTGCAATACTGGAATGGATTGATTTCCAAGGGAAGAAAAAGAAGATGGTGAAGTTGATGAAAAAGATGGATAGTTTTCTTCAGAAGCTACTTGATGAGAAACGAAGAAATTGGAGCAATGACCAAAGAAATATGACGTTGATTGATGTTATGTTAGACTTGCAACAAAAGGAACCGGAATTCTACACAGAGGAGATTGTGAAAGGTGTTGTTCTGGTAATGCTTGTAGCTGGCTCTGAAACTTCAGCTACAACTATGGAATGGGCACTCTCACTTCTCCTCAACCATCCAAAAAAAATGAATAAGGTTATGACAGAGATAAACACTTGTATGCATCAAGATCAACTTATGAATGAATCAGGCGCTTTAAAACTAAAATACTTGCAAAAGGTAATTATGGAGACACTTCGTTTATATCCCGTGGCTCCATTATTAATACCACATGAGTCCTCCAATGATTGCAATGTTTGTGGTTTTGATATACCAAAAGGGACAATGCTTCTTGTGAATCTTTGGACCTTACATAGAGACCATAACTTATGGGTGGACCCAACAAGGTTTGTGCCAGAAAGATTTGAAGAAAGTGGGTTAGATAGTGAGATTTATAATATGATTCCATTTGGTGTTGGAAGGAGAGCTTGTCCTGGATCTGTTTTAGCAAAACGTTTTATGGCAAATGCAATAGGGTCTTTGATTCAATGTTTTGAGTGGGAGAAGATTGGAAATGAAGAAATTGACATGACCGAAGGAACAGGTCTTACAATGCCTAAAGTTGAACCTTTAGTTGCTTTATGCAGGCCACGCCAAGTTATGGTAAAGCTTCTCTCGAATATATAA 1524 0.3858 MEETKWMMPTSLFLLTFLILLKLIQKKQSNHKNLPPSPPSLPLIGHLHLIKQPLHRSLHNLTKTYGHIFFLHVGTRKILVVSSPSAVEECLSNNDITFANRSVTLAGKYLNYNNTTLGFSSYGKLWRKLRRLTTTELFSSNRLAMFTKVREDEVKLLIKQIFEGCKGEIMSKVDLKTKTLELSFNIMLRVISGKRYYGEDDDVAIGGKEFQILMNEYIELLGSGNLNDFFAILEWIDFQGKKKKMVKLMKKMDSFLQKLLDEKRRNWSNDQRNMTLIDVMLDLQQKEPEFYTEEIVKGVVLVMLVAGSETSATTMEWALSLLLNHPKKMNKVMTEINTCMHQDQLMNESGALKLKYLQKVIMETLRLYPVAPLLIPHESSNDCNVCGFDIPKGTMLLVNLWTLHRDHNLWVDPTRFVPERFEESGLDSEIYNMIPFGVGRRACPGSVLAKRFMANAIGSLIQCFEWEKIGNEEIDMTEGTGLTMPKVEPLVALCRPRQVMVKLLSNI 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03208 507 SUPERFAMILY Cytochrome P450 35 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03208 507 PANTHER CYTOCHROME P450 82C3-RELATED 13 498 - -
Vivi5g03208 507 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03208 507 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03208 507 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03208 507 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03208 507 FunFam Cytochrome P450 family protein 25 500 - -
Vivi5g03208 507 CDD CYP81 66 490 - -
Vivi5g03208 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Vivi5g03208 507 Pfam Cytochrome P450 35 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03208 507 Gene3D Cytochrome P450 19 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03208 507 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03208 507 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03208 507 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03208 507 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03208 507 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03208 507 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03208 507 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03208 507 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03208 507 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03208 Vivi-Chr5 122013360 122021399 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03208 10 504 Cytochrome P450 AT4G37320 45.257 3.37e-159 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03208 - - gmx:100794610 690.263