Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03189 ATGGAGATAGAGGTGGAGAGAGGGATGAGTTCAAAAAGAGGAATGCATCTAGTGTGGGAAAATTTGAGTGTTGTGATTCCAAATTTTGGGAATGGACACACAAAGAGGTTGCTTAACGGTTTGAATGGATATGGTGAACCAAACAGAATCATGGCTATTATGGGTCCATCTGGTTCTGGAAAATCTACTCTTCTTGATGCTTTGGCAGGTAGACTATCTAGAAATGTTATCATGTCTGGAAATGTGCTTTTAAATGGAAAGAAAAGGAGTCTAGACTATGGAGTTGTAGCTTATGTGACACAAGAAGACATAATGTTGGGAACACTAACAGTCAGAGAAACAATATCATACTCAGCAAATCTAAGACTTCCAACAACAATGACAAAACAAGAGATAAATGACATTGTTGAAGGAACAATCACTGAAATGGGTCTTCAAGATTGTGCAGATAGGCTTATAGGAAACTGGCACTTGAGAGGTATAAGTGGTGGTGAAAAGAAAAGACTAAGCATAGCACTTGAAATCTTAACAAGACCTTGTCTCTTGTTCCTTGATGAACCTACAAGTGGTTTGGACAGTGCTTCAGCTTATTTTGTTGCTCAAACTTTGAGAAATATAGCTCATGATGGGAGAACTGTGATTTCTTCTATTCATCAACCGAGTAGCGAGGTTTTTGCGTTGTTTGATGATCTCTTTCTGCTTTCTGGAGGTCAAACAATTTACTTTGGACCGGCCGAAAATGCAGTTGAGTTCTTTGCGATAGCAGGATTTCCGTGTCCGAGTAGAAGAAACCCTTCTGATCACTTTCTTCGCTGTATTAATTCAGACTTCGACACTGTCACGACTACTATGATGGCCTCCCGGGGAACACATGAACAAAAAACATTAGCACCGTCTACGATGAACTTATCAACAGCGGCGACCAAAGCAGTACTCATAGAGAAATACCGTTGGTCTGAATATGCGACTTGTGCAAGAGCAAGAATCAAACAAATGTCAAACTTTGACGGGCGTGGTTATGAAAGTAAAAGCAAGAGCCAAGCAAAATGGTGGAAGCAACTATCGACTTTGACTCAAAGATCGTTTGTGAACATGTCTAGAGATGTAGGGTACTATTGGATAAGGTTAACAATCTATGTTGCTTTATCTTTGTGTGTTGGAACAATCTTTTTTGAAGTTGGTTCAAGTTATAATGCCATTCTTGCAAGAGGAGCATGCGGCGCTTTTATATCAGGTTTCATGACATTCATGTCTATAGGAGGATTCCCATCATTCATAGAGGAAATGAAGGTTTTCTATAAAGAAAGGATGAATGGATATTATGGAGTTGCAGTCTACATTCTGTCCAATTTTCTCTCTTCTTTTCCTTTTGTAGCAGTCATGTCCTTTGCTACTGGGACTATAACGTATTATATGGTTAAATTTCGACCCGAGTTTTCACATCTTTTGTATATTTGTTTGGATCTTTTGGGATGTATTGCTGTTGTGGAGAGCTCAATGATGATTATAGCTGCATTGGTTCCTAACTTTCTTATGGGATTGATAATTGGAGCAGGTTATATTGGTCTTATGATGATGACTGCTGGCTATTTCCGGCAGATCCATGATCTTCCTAAATTCTTCTGGCGTTACCCAATTTCATACATCAATTATGGAGCATGGGGATTGCAGGGAGCATTCAAGAATGACATGATTGGAATGGAGTTTGGTCCATTGATAGCTGGTGGACCAAAAGTGAAAGGAGAAATAATCCTCACAACAATGCTTGGAATGAAGGTTGATTATTCAAAATGGTGGGACTTAGCTGTGGTCATCTTCATCCTGGTTTTGCTAAGAGTTATTTTCTTTTTCATTCTCAAATTCAAGGAGAGAGTTGTACCTTTCCTTCACAGTATCTACACAAAGCAAACACTGCAACGAATCATGAAGCGGTCTTCGTTCAGGAAAACTCCGTCGTTCGCTTCCAAGAGACACCAACCACTGCATCCATTGTCTTGTCAAGAGGGTCTCAACTCTCCATGTCATTGA 2028 0.3969 MEIEVERGMSSKRGMHLVWENLSVVIPNFGNGHTKRLLNGLNGYGEPNRIMAIMGPSGSGKSTLLDALAGRLSRNVIMSGNVLLNGKKRSLDYGVVAYVTQEDIMLGTLTVRETISYSANLRLPTTMTKQEINDIVEGTITEMGLQDCADRLIGNWHLRGISGGEKKRLSIALEILTRPCLLFLDEPTSGLDSASAYFVAQTLRNIAHDGRTVISSIHQPSSEVFALFDDLFLLSGGQTIYFGPAENAVEFFAIAGFPCPSRRNPSDHFLRCINSDFDTVTTTMMASRGTHEQKTLAPSTMNLSTAATKAVLIEKYRWSEYATCARARIKQMSNFDGRGYESKSKSQAKWWKQLSTLTQRSFVNMSRDVGYYWIRLTIYVALSLCVGTIFFEVGSSYNAILARGACGAFISGFMTFMSIGGFPSFIEEMKVFYKERMNGYYGVAVYILSNFLSSFPFVAVMSFATGTITYYMVKFRPEFSHLLYICLDLLGCIAVVESSMMIIAALVPNFLMGLIIGAGYIGLMMMTAGYFRQIHDLPKFFWRYPISYINYGAWGLQGAFKNDMIGMEFGPLIAGGPKVKGEIILTTMLGMKVDYSKWWDLAVVIFILVLLRVIFFFILKFKERVVPFLHSIYTKQTLQRIMKRSSFRKTPSFASKRHQPLHPLSCQEGLNSPCH 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03189 675 FunFam ABC transporter G family member 11 11 255 - -
Vivi5g03189 675 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 17 261 IPR003439 GO:0005524
Vivi5g03189 675 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 11 644 - -
Vivi5g03189 675 Pfam ABC-2 type transporter 218 274 IPR043926 GO:0140359
Vivi5g03189 675 CDD ABCG_EPDR 14 243 - -
Vivi5g03189 675 Pfam ABC transporter 41 189 IPR003439 GO:0005524
Vivi5g03189 675 SMART AAA_5 47 246 IPR003593 GO:0016887
Vivi5g03189 675 ProSitePatterns ABC transporters family signature. 161 175 IPR017871 GO:0005524|GO:0016887
Vivi5g03189 675 Pfam ABC-2 type transporter 353 561 IPR013525 GO:0016020|GO:0140359
Vivi5g03189 675 Gene3D - 5 254 IPR027417 -
Vivi5g03189 675 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 259 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03189 Vivi-Chr5 121680332 121686628 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03189 49 232 Calmodulin-binding Proteins AT2G36910 29.756 3.32e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03189 K05681 - gmx:100806806 1129.01