Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03186 ATGGAGATTGAAGCAGCAAGTGGTGGTAGCAACAACAAAAACAAAAGATGCAACATGGATGAGAGTGAAGAAGATGAAACATATTGTGGCATTACTACTAGAGGAAGTTTCTTAGCATGGGAGGATCTAAGAGTTATTATACCAAATTTTGGAAAAGGACCAACCAAAAAGATTCTTAATGGGCTTCATGGTTTTGCTGAGCCTGGTAGAATCATGGCTATTATGGGCCCTTCTGGTTCTGGAAAATCTACTTTGCTTGATTCTCTTGCAGGTAGACTCTCCAAAAATGTTGTAATGACAGGAAATGTTCTTCTCAATGGGAAGAAAAAAACTCCAGGCTATGGTGGTTTTGTTGCGTACGTAACACAAGAAGATGTGTTATTGGGAACATTGACAGTAAGAGAAACTATAACATATTCGGCGCATCTACGTCTTCCAACATCAATGTCAAAAGAAGAAGTTAGCGGCATAATCGAAGGAACAATCATAGAAATGGGTCTTCAAGACTGTGCTGATAGGTTAATAGGAAACTGGCATTTGAGAGGTATAAGTGGCGGTGAAAAGAAAAGACTTAGCATTGCACTTGAGATTCTCACAAGGCCGCGTTTATTGTTTCTCGATGAACCAACCAGTGGATTAGATAGTGCTTCAGCGTTCTTCGTTGTTCAAACTCTTCGAAACGTTGCTCGTGATGGAAGAACTGTTATTTCTTCTATTCATCAACCTAGCAGTGAAGTCTTTGCTCTTTTTGATGATCTTTTCTTACTTTCTGGTGGTGAAACTGTTTATTTTGGTGAAGCAAAATTGGCAATTGAGTTTTTCGCTGAGGCTGGTTTCCCTTGTCCGCGTAAAAGAAATCCTTCTGATCATTTCTTAAGATGTATCAATTCTGATTTTGACGTTGTAACGGCTACGCTAAAGGGATCTCAAAGGATTCATGATGTTCCGAATTCGGCAGATCCTTTTTTGAACTTGGCAACAGCGCAGATTAAAGAAAGGTTAATCGAGAGATTTAGGCGTTCAAATTACGCGAGAAGAGTAAAAGACAAGATCAAAGAACTATCAACTCATGAAGGGCCTGAAAACGAGCCAAAATATGGAAGCCAAGCTAGTTGGTGGAAGCAACTCACTACATTGACAAGGAGATCATTTGTGAACATGAGTAGAGATGTTGGTTACTATTGGTTGAGAATTATAATCTACATCATTGTATCTATATGTGTTGGAACCATCTATTTTGATATTGGTTATAGCTATACTTCAATCTTGGCTCGCGGTGCGTGTGGTGCATTTATATCAGGATTCATGACTTTCATGTCAATTGGAGGCTTTCCATGTTTTATTGAAGAAATGAAGGTATTTTATCGAGAAAGGCTTAATGGATATTATGGCGTAGCGGCATATATTTTATCGAACTTTCTATCATCATTCCCATTCTTGGTTTCTATTGCTGTTACTTCTAGCACCATCACATATAACATGGTGAAATTCAGGCCAGGATTCATTCACTTTGCGTTTTTCACTCTCAATATCTACGGATGCATCTCGGTGATCGAGAGTCTCATGATGGTTGTAGCTTCACTTGTTCCGAATTTCCTCATGGGAATCATTACAGGAGCTGGAATCATTGGAATCATGATGATGACCTCTGGATTCTTTAGGTTGCTATCTGATCTTCCAAAACCAGTTTGGCGCTATCCCATTTCGTATATCAGTTATGGCGCATGGGCAATACAGGGTTCATACAAGAACGACTTACTCGGACTCGAGTTTGAACCACTAGTAGCCGGCGACCCGAAACTGACAGGAGAATATGTGATAACACACATGTTAGGAATTGAGCTAAGCCATTCAAAATGGTGGGACTTAGCAGCACTTTTACTCATTCTCATATGTTACAGGCTTCTATTCTTTATTGTTCTCAAGTTCAAGGAAAGAGCATCACCATTGTTTAAGAACCTTTACGCCAAAAGAACCATACAACAGCTTGAGAAAAGACCTTCATTCAGAAGAATGCCATCTTTTCCTTCATTGAGGCATCAACCACTTCACTCACTATCTTCTCAAGAGGGTCTTGATTCTCCACTTCAATACTAG 2097 0.3953 MEIEAASGGSNNKNKRCNMDESEEDETYCGITTRGSFLAWEDLRVIIPNFGKGPTKKILNGLHGFAEPGRIMAIMGPSGSGKSTLLDSLAGRLSKNVVMTGNVLLNGKKKTPGYGGFVAYVTQEDVLLGTLTVRETITYSAHLRLPTSMSKEEVSGIIEGTIIEMGLQDCADRLIGNWHLRGISGGEKKRLSIALEILTRPRLLFLDEPTSGLDSASAFFVVQTLRNVARDGRTVISSIHQPSSEVFALFDDLFLLSGGETVYFGEAKLAIEFFAEAGFPCPRKRNPSDHFLRCINSDFDVVTATLKGSQRIHDVPNSADPFLNLATAQIKERLIERFRRSNYARRVKDKIKELSTHEGPENEPKYGSQASWWKQLTTLTRRSFVNMSRDVGYYWLRIIIYIIVSICVGTIYFDIGYSYTSILARGACGAFISGFMTFMSIGGFPCFIEEMKVFYRERLNGYYGVAAYILSNFLSSFPFLVSIAVTSSTITYNMVKFRPGFIHFAFFTLNIYGCISVIESLMMVVASLVPNFLMGIITGAGIIGIMMMTSGFFRLLSDLPKPVWRYPISYISYGAWAIQGSYKNDLLGLEFEPLVAGDPKLTGEYVITHMLGIELSHSKWWDLAALLLILICYRLLFFIVLKFKERASPLFKNLYAKRTIQQLEKRPSFRRMPSFPSLRHQPLHSLSSQEGLDSPLQY 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03186 698 SMART AAA_5 68 240 IPR003593 GO:0016887
Vivi5g03186 698 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 26 666 - -
Vivi5g03186 698 MobiDBLite consensus disorder prediction 680 698 - -
Vivi5g03186 698 Pfam ABC-2 type transporter 375 584 IPR013525 GO:0016020|GO:0140359
Vivi5g03186 698 Gene3D - 39 277 IPR027417 -
Vivi5g03186 698 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 271 IPR027417 -
Vivi5g03186 698 ProSitePatterns ABC transporters family signature. 183 197 IPR017871 GO:0005524|GO:0016887
Vivi5g03186 698 MobiDBLite consensus disorder prediction 676 698 - -
Vivi5g03186 698 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 38 283 IPR003439 GO:0005524
Vivi5g03186 698 Pfam ABC-2 type transporter 240 296 IPR043926 GO:0140359
Vivi5g03186 698 MobiDBLite consensus disorder prediction 1 25 - -
Vivi5g03186 698 Pfam ABC transporter 66 211 IPR003439 GO:0005524
Vivi5g03186 698 FunFam ABC transporter G family member 11 32 277 - -
Vivi5g03186 698 CDD ABCG_EPDR 35 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03186 Vivi-Chr5 121581007 121586082 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03186 14 252 Calmodulin-binding Proteins AT2G36910 28.295 1.27e-12 69.7