Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03126 ATGGCGAAAAAGTGGCAGAAAATGGCAGTGCGAAGACGCAAGAGGATCTCGTACCTAAGAAATGAAGTGGATTTGAAATCTTCAGCGGTAAATAAGGGCCACTTTGTTGTTTACAGCATTGATCGTAAGCGATTCGTGGTTCCTCTAGAGTATCTTAGCACGAACGTGTTCAGAGAACTCTTTAAATGGTCCGAAGAAGTGTTTGGGTTGCCGGGGAATAGACCTATCATGTTGCCGTGTGATAGTGTTTTCTTGAACTATGCAATCTCGTTAGTTCAAGAACGGATTCCTGAAGATGTGGAGAAAGCTTTGATCACTTTCATGTATGCTTGTCACAACAAGGCATCCTCTAATTCCTGTCATGATCTTAGGCAAAAAAGTGAACAGATAATTATCTATGGGTTTTGA 408 0.4142 MAKKWQKMAVRRRKRISYLRNEVDLKSSAVNKGHFVVYSIDRKRFVVPLEYLSTNVFRELFKWSEEVFGLPGNRPIMLPCDSVFLNYAISLVQERIPEDVEKALITFMYACHNKASSNSCHDLRQKSEQIIIYGF 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03126 135 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 119 IPR003676 GO:0009733
Vivi5g03126 135 Pfam Auxin responsive protein 3 91 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03126 Vivi-Chr5 120254595 120255002 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03126 1 95 Calmodulin-binding Proteins AT2G24400 25.664 4.79e-08 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03126 - - gmx:100802572 188.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03126 5 120254595 120255002 Vivi5g03126 5 120254595 120255002 ECH