Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03108 ATGGATCCTTCTAATTCAAGAGTTGTAAACATAAACACTGATCAACGATTCCCTTCTGCTCGCATGAAGTCTCCAAATTTTCTTTCCTCCATCGGTGCTCATGAATTCTTATCAATTGAGACATGGAAAGCAGCTTTAACAGAGTTAATAGCAACAACTTTACTTATGTTTACTCTAATAAGTTCCATTGTTGCTTGTTTGAACTCATCGCACAATCCACAAATTATTATTCCTTTCGCAGTCTTCATCATAGCCTTCTTATTCCTAAATGTCACTGTTCCTCTAACCGGTGGCCACATAAGTCCTGTCTTCTCATTCATAGCTGCTCTAAAAGGTGTTGTCACTCTTTCTCGTGCACTCCTATATGTCTTAGCACAATACATTGGCGCGATAATTGGTTTCTTTATAATTAAGTGTGTAATGGACCCCAAATTCATAGATACATACTCCTTAGGAGGGTGTTCCCTTGGTGATAAAGGACAAAGTTATGGTATGATAAAGCCACAAGATGCATTGTTGCTTGAATTCACTTGCACGTTTTTGGTATTATTTGTGGGTCTCACGTGTGCTTTTGACAAAAGAAGACACAAGGATTTGGGCTTGCCAATGATTTGCATGGTGGTAGCAGGCTCTTTGGCACTAGCAGTATTTGTGTCTATAACTGTAACTGGAAATGTTGGATATGCTGGTGTTGGGATGAATCCAGCAAGATGCTTAGGTCCAGCATTGCTTTATGGAGGCTCATTATGGAATGAACATTGGGTTTTTTGGGTTGGGCCTTTCTTGGCTTGTTTAGTATATTACAGTGTCTCTATTAATATGCCAAAAGAGAGTTTGGATTGGGTTGAAGGAGAATATGATGTCTTAAGGTTGGTTGTGGGTTCTTGTGGGACTGTCTCTGCTAGTACAGTCTGA 915 0.3967 MDPSNSRVVNINTDQRFPSARMKSPNFLSSIGAHEFLSIETWKAALTELIATTLLMFTLISSIVACLNSSHNPQIIIPFAVFIIAFLFLNVTVPLTGGHISPVFSFIAALKGVVTLSRALLYVLAQYIGAIIGFFIIKCVMDPKFIDTYSLGGCSLGDKGQSYGMIKPQDALLLEFTCTFLVLFVGLTCAFDKRRHKDLGLPMICMVVAGSLALAVFVSITVTGNVGYAGVGMNPARCLGPALLYGGSLWNEHWVFWVGPFLACLVYYSVSINMPKESLDWVEGEYDVLRLVVGSCGTVSASTV 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03108 304 SUPERFAMILY Aquaporin-like 35 266 IPR023271 -
Vivi5g03108 304 Gene3D Glycerol uptake facilitator protein. 28 277 IPR023271 -
Vivi5g03108 304 Pfam Major intrinsic protein 37 263 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03108 304 PANTHER AQUAPORIN-LIKE 19 294 - -
Vivi5g03108 304 PRINTS Major intrinsic protein family signature 215 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03108 304 PRINTS Major intrinsic protein family signature 43 62 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03108 304 PRINTS Major intrinsic protein family signature 81 105 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03108 304 PRINTS Major intrinsic protein family signature 118 137 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03108 304 PRINTS Major intrinsic protein family signature 174 192 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03108 304 PRINTS Major intrinsic protein family signature 254 274 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03108 Vivi-Chr5 119857233 119865735 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03108 10 266 Major Intrinsic Protein MIP AT2G37170 27.612 1.06e-24 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03108 K09866 - gmx:100797262 424.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03108 5 119857233 119865735 Vivi5g03108 5 119857233 119865735 ECH