Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03107 ATGGATCCTTCTAATTCAAGAGTTGTAAACATGAACACTGATCAACGATTCCCCTCTGCAAGCAAGAAATCTCCAAATTTTCTTTCCTCCATCGGTGCTCATGAATTCTTATCAATTGAGACATGGAAAGCAGCTTTAATGGAGTTAATAGCAACAACTTTACTTATGTTTACTCTAATAAGTTCTATTGTTGCGTGTTTGGACTCATCGCACAATCCTCAATTTATAATTCCCTTTGTAGTCTTCATCATTGCCTTCTTATTCCTAATTGTCATAGTTCCTCTAACTGGTGGCCACATGAATCCTGTTTTCTCATTCATAGCTGCTCTTAAAGGCATTGTCACTCTTTCTCGTGCGCTCCTTTATGTCTTAGCACAATGCATTGGCTCAATAATTGGTTTCTTTATACTCAAATGTGTAATGGACCCCAAAATAATAGATACATACTCTTTAGGAGGTTGTGCCCTTGGTGACAAAGAACATAATCCTGATATAATAAAGCCACAAGATGCATTGTTGCTTGAATTTACTTGCACATTTTTGGTATTATTTGTGGGTCTCACATGTGCTTTTGACAAAAGAAGACATAAGGATTTAGGCTTGCCAATGATTTGTATGGTGGTAGCAGGCTCTCTCGCACTAGCAGTATTTGTATCTATAACTATAACTGGACATGTTGGATATGCTGGTGTTGGGATGAATCCAGCAAGATGCTTAGGCCCAGCATTGCTTCATGGAGGCTCATTATGGAATGGACATTGGGTTTTTTGGGTTGGGCCTTTCTTGGCCTGCTTAGTCTATTATAGTGTCTCTATTAATCAACCAAAAGAGAGTTTAGATTGGGTTGATGGAGAATATGATGTCTTAAGGTTGGCTGTGGGTTCTTGTCGGACTCTCCCTGCTAGTGCAGTCTAA 915 0.3913 MDPSNSRVVNMNTDQRFPSASKKSPNFLSSIGAHEFLSIETWKAALMELIATTLLMFTLISSIVACLDSSHNPQFIIPFVVFIIAFLFLIVIVPLTGGHMNPVFSFIAALKGIVTLSRALLYVLAQCIGSIIGFFILKCVMDPKIIDTYSLGGCALGDKEHNPDIIKPQDALLLEFTCTFLVLFVGLTCAFDKRRHKDLGLPMICMVVAGSLALAVFVSITITGHVGYAGVGMNPARCLGPALLHGGSLWNGHWVFWVGPFLACLVYYSVSINQPKESLDWVDGEYDVLRLAVGSCRTLPASAV 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03107 304 PANTHER AQUAPORIN-LIKE 18 294 - -
Vivi5g03107 304 Pfam Major intrinsic protein 37 263 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03107 304 Gene3D Glycerol uptake facilitator protein. 28 278 IPR023271 -
Vivi5g03107 304 PRINTS Major intrinsic protein family signature 215 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03107 304 PRINTS Major intrinsic protein family signature 43 62 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03107 304 PRINTS Major intrinsic protein family signature 81 105 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03107 304 PRINTS Major intrinsic protein family signature 254 274 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03107 304 PRINTS Major intrinsic protein family signature 174 192 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03107 304 PRINTS Major intrinsic protein family signature 118 137 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03107 304 SUPERFAMILY Aquaporin-like 35 266 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03107 Vivi-Chr5 119835890 119837956 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03107 5 266 Major Intrinsic Protein MIP AT2G37170 25.979 6.53e-23 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03107 K09866 - gmx:100797262 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03107 5 119835890 119837956 Vivi5g03107 5 119835890 119837956 ECH