Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03106 ATGGATCCCTCTCATTCAAGAGTTGTAAGCATGAACATTGATCAAGGATTCCCTTCTGCTCACAAGAAGTCTCCAAATTTTCTTTCTTCCATCGGTGCTCATGAATTCTTATCAATTGAGACATGGAAAGCAGCTTTAACGGAATTAATAGCAACAACCTTACTTATGTTTACTCTAATAAGTTCTATTGTTGCATGTTTGGATTCATCGCACAATCCTCAATTTATAATCCCTTTTGCAGTCTTCTTCATAGCCTTCTTATTCCTAAATGTCACAGTTCCTCTGACGGGTGGTCATATGAGTCCTGTTTTCTCATTCATAGCTGCTCTAAAAGGTGTTATCACTCTTTCTCGTGCACTTCTTTATGTCTTAGCACAATGCATTGGCGCAATACTTGGTTTCTTTATACTCAAGTGTGTAATGGACCCTAAATTAATAGAAACATACTCCTTAGGAGGTTGTTCCCTTGGTGACAAAGAACAAAATCCTAATATAATAAAGCCACAAGATGCATTATTGATTGAATTCACTTGCACATTTTTGGTACTATTTGTGGGTCTCACATGTGCTTTTGACAAAAGAAGGCACAAAGATATGGGCTTGCAAAAGATTTGTATGGTGGTAGCAGGCTCTCTAGCACTAGCAGTATTTGTGTCTATAACAGTAACTGGACATGCTGGATATGCTGGTGTTGGGATGAATCCAGCAAGATGCTTAGGCCCAGCATTGCTTCATGGGGGCTCATTATGGAATGGACATTGGGTTTTTTGGGTTGGACCATTCTTGGCATGCTTAGTGTATTATAGCGTTTCTATTAATCTACCAAAAGAGAGTTTGGATTGGGTTGATGGAGAATATGATATCTTAAGGTTGGCGGTCGGTTCTTGCGGGACTCTCTCTGCTAGTGCAGTCTGA 915 0.3967 MDPSHSRVVSMNIDQGFPSAHKKSPNFLSSIGAHEFLSIETWKAALTELIATTLLMFTLISSIVACLDSSHNPQFIIPFAVFFIAFLFLNVTVPLTGGHMSPVFSFIAALKGVITLSRALLYVLAQCIGAILGFFILKCVMDPKLIETYSLGGCSLGDKEQNPNIIKPQDALLIEFTCTFLVLFVGLTCAFDKRRHKDMGLQKICMVVAGSLALAVFVSITVTGHAGYAGVGMNPARCLGPALLHGGSLWNGHWVFWVGPFLACLVYYSVSINLPKESLDWVDGEYDILRLAVGSCGTLSASAV 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03106 304 Pfam Major intrinsic protein 37 263 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03106 304 Gene3D Glycerol uptake facilitator protein. 28 276 IPR023271 -
Vivi5g03106 304 PRINTS Major intrinsic protein family signature 118 137 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03106 304 PRINTS Major intrinsic protein family signature 174 192 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03106 304 PRINTS Major intrinsic protein family signature 81 105 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03106 304 PRINTS Major intrinsic protein family signature 43 62 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03106 304 PRINTS Major intrinsic protein family signature 215 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03106 304 PRINTS Major intrinsic protein family signature 254 274 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03106 304 SUPERFAMILY Aquaporin-like 35 266 IPR023271 -
Vivi5g03106 304 PANTHER AQUAPORIN-LIKE 20 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03106 Vivi-Chr5 119795252 119797603 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03106 6 266 Major Intrinsic Protein MIP AT2G37170 25.714 7.01e-23 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03106 K09866 - gmx:100797262 414.461