Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03098 ATGTCGACATTTGTTGGTTGCCTTGGGGCATGGTTATGGCCGTCAATGGTTATCATTTCAGAAATTGTCCAAACCTTCATCTTAGCAAATTTCTCTTTCTACTTACTATTATGTCAAAAGACATGGAAAGCAGCTTTAACAGAATTAATTGCAACTGCCTCACTAATGTTCACCTTATCTACCTGCATTATCGCATGCTTGGACTCACATGAAGTTGATCCTAAGCTTAGTGTTCCCTTTGTAGTCTTCATCATAGTATTCCTATTCTTAATTGTCACAGTTCCTCTATCAGGTGGCCACATGAGCCCTGTTTTCACTTTCATAGCTACTCTAAAAGGTGTAACCACTCTTTCTCGTGCACTCCTTTACGTCTTAGCACAATGTATTGGCTCGATAATTGGTTTCTATATACTCAAGTGCGTGATGGATCCAAGACTAGTAAACACATATTCATTGGGAGGTTGTGCTATTGGTGGCAAAGGACTCAATTCTAGTATCAGTCAGTATGAAGCTTTGTTATTGGAATTCTCTTGCACATTTTTAGTACTCTTTTTGGGTGTTACATTGGCTTTTGACAAAAAAAGATCAAAGAATTTGGGCTTGCCGATGGTATGTTTGGTCATAGCTGGTGCCATGGCGTTGGCTGTATTTATGTCTGTAACTGTGACTGGACGGGCCGGTTATGCTGGTGTTGGGCTTAACCCGGCAAGATGCTTAGGTGCTGCATTGGTTCATGGAGGTTCACTATGGAATGGGCTTTGGGTTTTTTGGGTCGGGCCTATTTTGGCCTGTTTAATCTATTACAGTGTCTCTATCAACCTACCAAAGGACCATTTAGTTTTGATGGATGAAGAATATGATGTCTTAAAGTTGGCTATTGGTTCTAGTGGGACAATAACTAAGGGTGACATTTCAAAGGAGACTTTTTATTCTGCCTCTCATATATCTCAAACCACTTGA 960 0.4042 MSTFVGCLGAWLWPSMVIISEIVQTFILANFSFYLLLCQKTWKAALTELIATASLMFTLSTCIIACLDSHEVDPKLSVPFVVFIIVFLFLIVTVPLSGGHMSPVFTFIATLKGVTTLSRALLYVLAQCIGSIIGFYILKCVMDPRLVNTYSLGGCAIGGKGLNSSISQYEALLLEFSCTFLVLFLGVTLAFDKKRSKNLGLPMVCLVIAGAMALAVFMSVTVTGRAGYAGVGLNPARCLGAALVHGGSLWNGLWVFWVGPILACLIYYSVSINLPKDHLVLMDEEYDVLKLAIGSSGTITKGDISKETFYSASHISQTT 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03098 319 Gene3D Glycerol uptake facilitator protein. 32 274 IPR023271 -
Vivi5g03098 319 SUPERFAMILY Aquaporin-like 41 266 IPR023271 -
Vivi5g03098 319 PANTHER AQUAPORIN-LIKE 31 292 - -
Vivi5g03098 319 PRINTS Major intrinsic protein family signature 254 274 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03098 319 PRINTS Major intrinsic protein family signature 82 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03098 319 PRINTS Major intrinsic protein family signature 119 138 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03098 319 PRINTS Major intrinsic protein family signature 215 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03098 319 PRINTS Major intrinsic protein family signature 43 62 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03098 319 Pfam Major intrinsic protein 40 263 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03098 Vivi-Chr5 119667907 119675460 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03098 40 265 Major Intrinsic Protein MIP AT4G35100 32.500 3.16e-20 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03098 K09866 - gmx:100804160 412.149