Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03097 ATGGGGCCCAAAAACCCTTCAATAGGGAAGTTTCAGGCTTCTATTGGAGCACATGAGATTTTCAGCCCGGAGACATGGAAAGCAGCTTTAACAGAATTAATTGCAACTGCCTCACTAATGTTCACCTTATCTACCTGCATTATCGCATGCTTGGACTCACATGAAGTTGATCCTAAGCTTAGTGTTCCCTTTGTAGTCTTCATCATAGTATTCCTATTCTTAATTGTCACAGTTCCTCTATCAGGTGGCCACATGAGCCCTGTTTTCACTTTCATAGCTACTCTAAAAGGTGTAACCACTCTTTCTCGTGCACTCCTTTACGTCTTAGCACAATGTATTGGCTCGATAATTGGTTTCTATATACTCAAGTGCGTGATGGATCCAAGACTAGTAAACACATATTCATTGGGAGGTTGTGCTATTGGTGGCAAAGGACTCAATTCTAGTATCAGTCAGTATGAAGCTTTGTTATTGGAATTCTCTTGCACATTTTTAGTACTCTTTTTGGGTGTTACATTGGCTTTTGACAAAAAAAGATCAAAGAATTTGGGCTTGCCGATGGTATGTTTGGTCATAGCTGGTGCCATGGCGTTGGCTGTATTTATGTCTGTAACTGTGACTGGACGGGCCGGTTATGCTGGTGTTGGGCTTAACCCGGCAAGATGCTTAGGTGCTGCATTGGTTCATGGAGGTTCACTATGGAATGGGCTTTGGGTTTTTTGGGTCGGGCCTATTTTGGCCTGTTTAATCTATTACAGTGTCTCTATCAACCTACCAAAGGACCATTTAGTTTTGATGGATGAAGAATATGATGTCTTAAAGTTGGCTATTGGTTCTAGTGGGACAATAACTAAGGGTGACATTTCAAAGGAGACTTTTTATTCTGCCTCTCATATATCTCAAACCACTTGA 912 0.4145 MGPKNPSIGKFQASIGAHEIFSPETWKAALTELIATASLMFTLSTCIIACLDSHEVDPKLSVPFVVFIIVFLFLIVTVPLSGGHMSPVFTFIATLKGVTTLSRALLYVLAQCIGSIIGFYILKCVMDPRLVNTYSLGGCAIGGKGLNSSISQYEALLLEFSCTFLVLFLGVTLAFDKKRSKNLGLPMVCLVIAGAMALAVFMSVTVTGRAGYAGVGLNPARCLGAALVHGGSLWNGLWVFWVGPILACLIYYSVSINLPKDHLVLMDEEYDVLKLAIGSSGTITKGDISKETFYSASHISQTT 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03097 303 PRINTS Major intrinsic protein family signature 238 258 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03097 303 PRINTS Major intrinsic protein family signature 103 122 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03097 303 PRINTS Major intrinsic protein family signature 27 46 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03097 303 PRINTS Major intrinsic protein family signature 66 90 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03097 303 PRINTS Major intrinsic protein family signature 199 221 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03097 303 SUPERFAMILY Aquaporin-like 23 250 IPR023271 -
Vivi5g03097 303 Pfam Major intrinsic protein 22 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03097 303 PANTHER AQUAPORIN-LIKE 7 276 - -
Vivi5g03097 303 Gene3D Glycerol uptake facilitator protein. 13 260 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03097 Vivi-Chr5 119667905 119675460 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03097 1 270 Major Intrinsic Protein MIP AT3G26520 30.605 1.24e-20 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03097 K09866 - gmx:100804160 434.491