Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03092 ATGGATCCTTCTAATTCAAGAGTTGTAAACATGAACACTGATCAACGATTCCCCTTTGCAGGCAAGAAGTCTCCAAATTTTCTTTCCTCCATCGGTGCTCATGAATTCTTATCAATTGAGACATGGAAAGCAGCTCTAACAGAGTTAATAGCAACAACTTTACTTATGTTTACTCTAATAAGTTCTATTGTTGCATGTTTGGACTCATCGCACAATCCTCAATTTATAATTCCTTTTGCAGTCTTTGGTATTGCCTTCTTATTTCTTAATGTCACAGTTCCTCTAACTGGTGGCCACATGAGTCCTGTTTTTTCATTCATAGCTGCTCTTAAAGGCGTTGTCACTCTTTCTCGTGCGCTCCTTTATGTCTTAGCACAGTGCATTGGCTCAATAATTGGTTTCTTTATACTCAAGTGTGTAATGGACCCCAAAATAATAGATACGTACTCTTTAGGAGGTTGTGCCCTCGGTGACAAAGAACAAAATCCTGATATAATAAAGCCACAAGATGCATTGTTGCTTGAATTCACTTGCACGTTTTTGGTCCTATTTGTGGGTCTCACATGTGCTTTTGATAAAAGAAGACATAAGGATTTAGGCTTGCCAATGATTTGTGTGGTGGTAGCAGGCTCTCTCGCACTAGCAGTATTTGTATCTATAACTGTAACTGGACATGCTGGATATGCTGGTGTTGGGATGAATCCAGCAAGATGCTTAGGCCCAGCATTGCTTTATGGAGGCTCATTATGGAATGGACATTGGGTGTTTTGGGTTGGGCCTTTCTTGGCCTGCTTAGTCTATTATAGTGTCTCTATTAATCAACCAAAAGAGAGTTTAGATTGGGTTGATGGAGAATATGATGTCTTAAGGTTGGTTGTGGGTTCTTGTCGGACTCTCCCTACTAGTGCAGTCTGA 915 0.4033 MDPSNSRVVNMNTDQRFPFAGKKSPNFLSSIGAHEFLSIETWKAALTELIATTLLMFTLISSIVACLDSSHNPQFIIPFAVFGIAFLFLNVTVPLTGGHMSPVFSFIAALKGVVTLSRALLYVLAQCIGSIIGFFILKCVMDPKIIDTYSLGGCALGDKEQNPDIIKPQDALLLEFTCTFLVLFVGLTCAFDKRRHKDLGLPMICVVVAGSLALAVFVSITVTGHAGYAGVGMNPARCLGPALLYGGSLWNGHWVFWVGPFLACLVYYSVSINQPKESLDWVDGEYDVLRLVVGSCRTLPTSAV 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03092 304 Pfam Major intrinsic protein 37 263 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03092 304 Gene3D Glycerol uptake facilitator protein. 28 278 IPR023271 -
Vivi5g03092 304 SUPERFAMILY Aquaporin-like 35 266 IPR023271 -
Vivi5g03092 304 PRINTS Major intrinsic protein family signature 254 274 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03092 304 PRINTS Major intrinsic protein family signature 81 105 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03092 304 PRINTS Major intrinsic protein family signature 43 62 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03092 304 PRINTS Major intrinsic protein family signature 174 192 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03092 304 PRINTS Major intrinsic protein family signature 215 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03092 304 PRINTS Major intrinsic protein family signature 118 137 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03092 304 PANTHER AQUAPORIN-LIKE 21 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03092 Vivi-Chr5 119639893 119641679 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03092 14 266 Major Intrinsic Protein MIP AT3G54820 29.259 2.05e-24 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03092 K09866 - gmx:100797262 430.639