Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03091 ATGGATCCCTCTCATTCAAGAGTTGTTAACATAAACACTGATCAATTATTCTCTCCCTCAGTTGGCAAGAAGTCTCCAAATTTTCTTTCCTCCATCGGTGCTCATGAATTCTTATCAATTGAGACATGGAAAGCTGCTTTAACAGAGTTAATAGCAACAGCCTTACTTATGTTCACTCTAATAAGTTCAATTGTTGCATGTTTGGACTCATCACACAATCCTCAACTTATAATTCCCTTTGTAGTCTTCATCATAGCCTTCTTATTCCTAAACGTCACTGTTCCATTAACTGGTGGTCACATGAGTCCTGTTTTCTCATTCATAGCTGCTCTAAAAGGTGTTGTCACTCTTTCTCGTGCACTTCTTTATGTCTTAGCACAATGCATTGGCTCAATAATTGGTTTCTTTATACTCAAGTGTGTAATGGACCCCAAATTAATAGATATCTACTCCTTAGGAGGTTGTGCCCTTGGTGACAAAGAAAAGAATCCTAATATAATAAAGCCACAAGATGCATTATTGGTTGAATTCTCTTGCACGTTTTTGGTACTCTTTGTGGGTCTCACATGTGCATTTGACAAAAGAAGGCACAAGGATTTGGGCTTGGCAAAGATTTGCATGGTGGTGGCAGGCTCTCTGGCACTAGCAGTATTTGTGTCTATAACTGTAACAGGTCATGCTGGATATACTGGTGTTGGGATGAATCCAGCAAGATGCTTGGGCCCAGCACTGCTTTATGGAGGCTCCTTATGGAATGGACATTGGGTTTTTTGGGCTGGTCCGTTCTTGGCCTGCTTAGTGTATTATAGTATCTCTACTAATCTACCAAAACAGAGTTTCGATTGGGTTGATGGAGAATATGATGTCTTAAGGTTGACTATGGGTTCTCGCAGGACTGTCTCTGCTAGTGCAGTCTGA 918 0.4074 MDPSHSRVVNINTDQLFSPSVGKKSPNFLSSIGAHEFLSIETWKAALTELIATALLMFTLISSIVACLDSSHNPQLIIPFVVFIIAFLFLNVTVPLTGGHMSPVFSFIAALKGVVTLSRALLYVLAQCIGSIIGFFILKCVMDPKLIDIYSLGGCALGDKEKNPNIIKPQDALLVEFSCTFLVLFVGLTCAFDKRRHKDLGLAKICMVVAGSLALAVFVSITVTGHAGYTGVGMNPARCLGPALLYGGSLWNGHWVFWAGPFLACLVYYSISTNLPKQSFDWVDGEYDVLRLTMGSRRTVSASAV 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03091 305 PRINTS Major intrinsic protein family signature 82 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03091 305 PRINTS Major intrinsic protein family signature 255 275 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03091 305 PRINTS Major intrinsic protein family signature 44 63 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03091 305 PRINTS Major intrinsic protein family signature 119 138 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03091 305 PRINTS Major intrinsic protein family signature 175 193 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03091 305 PRINTS Major intrinsic protein family signature 216 238 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03091 305 SUPERFAMILY Aquaporin-like 36 267 IPR023271 -
Vivi5g03091 305 PANTHER AQUAPORIN-LIKE 22 293 - -
Vivi5g03091 305 Pfam Major intrinsic protein 38 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi5g03091 305 Gene3D Glycerol uptake facilitator protein. 29 279 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03091 Vivi-Chr5 119620964 119623895 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03091 34 267 Major Intrinsic Protein MIP AT3G54820 28.163 4.22e-21 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03091 K09866 - gmx:100797262 422.935