Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03086 ATGGCGAAAAAGTGGCAGAAAATGGCGGTTCGAAGACGCAAGAGGATCTCGTACCTAAGAAATGAAGTGGTTTTGAAATCTCCAGCGGTAAATAAGGGCCACTTTGTTGTTTACAGCATTGATCGTAAACGATTTGTGGTTCCTTTAGAGTATCTTAGCACGAACGTGTTCAGAGAACTCTTTAAATGGTCCGAAGAAGTGTTTGGGTTGCCGGGGAATAGACCTATCATGTTGCCGTGTGATAGTGTTTTCTTGAACTATGCAATCTCGTTAGTTCAAGAACGGATTCCTGAAGATGTGGAGAAAGCTTTGATCACTTTCATGATCTATGGCGACGCTCAAGAAACCGTAGCTAATGCAAGTGGAAACCGTGGGCAAAGGTTTCGTCCCCGTGAAGAAGACGAAGGATTGGGCGCGCAATTTTCGTTCAAAGGAATTTGA 441 0.4399 MAKKWQKMAVRRRKRISYLRNEVVLKSPAVNKGHFVVYSIDRKRFVVPLEYLSTNVFRELFKWSEEVFGLPGNRPIMLPCDSVFLNYAISLVQERIPEDVEKALITFMIYGDAQETVANASGNRGQRFRPREEDEGLGAQFSFKGI 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03086 146 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 110 IPR003676 GO:0009733
Vivi5g03086 146 MobiDBLite consensus disorder prediction 121 146 - -
Vivi5g03086 146 Pfam Auxin responsive protein 3 91 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03086 Vivi-Chr5 119480344 119483283 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03086 1 92 Calmodulin-binding Proteins AT4G34750 32.258 5.99e-08 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03086 - - gmx:100802572 157.918