Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03049 ATGTCAGTGGCTTTTATTAGCGTCATCTTGCTTCCAATTGTAGGAAATGCCGCAGAGCATGCAAGTGCTATCATGTTTGCCGTAAAGGACAAGCTAGATATCACAATTGGAGTTGCTGTTGGATCATCAACCCAGATATCGATGTTTGTGATCCCTTTCTGTGTGGTTGTTGGATGGTGCATGGGAAAAGAAATGGACTTGAATTTTCAACTCTTTGAGACTGCCACACTTTTTATCACTGTGCTGGTAGTTGCATTTATGATGCAGGAAGGGACCTCAAACTATTTTAAAGGCTTAATGCTTATTCTATGCTATCTTATAGTTGCTGCCAATTTTTTTGTACATGTCGACCCTAAAAGTGGTGAGTGA 369 0.4038 MSVAFISVILLPIVGNAAEHASAIMFAVKDKLDITIGVAVGSSTQISMFVIPFCVVVGWCMGKEMDLNFQLFETATLFITVLVVAFMMQEGTSNYFKGLMLILCYLIVAANFFVHVDPKSGE 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03049 122 Pfam Sodium/calcium exchanger protein 4 111 IPR004837 GO:0016020|GO:0055085
Vivi5g03049 122 Gene3D - 1 113 IPR044880 -
Vivi5g03049 122 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 1 118 IPR004713 GO:0006812|GO:0008324|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03049 Vivi-Chr5 118877920 118879183 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03049 3 122 Antiporters AT1G55730 80.000 1.86e-66 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03049 K07300 - vvo:131607130 241.121