Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03047 ATGCATTTTCACATTCCTTATCTCTCAAACACCATGACCAATCTCAACCTCTCCTCCTCCTCTTCTTCCTCTTCCTCCTCGCCTTTCGCCGCGGACTTCAACATGGTCTATTCCCTTATTCTCTTCATCTTCCAAAACATCCAAACTCTTGAAATTCTCATAGCAATCACCATCTTCATAATCATTCATTCCCTCAAACAAAAGAACCATCATGGTTTACCTATTTGGCCTTTTCTTGGTATGTTACCTTCTCTACTCAATGGCCTAAGAACCAACTTGTATGAATGGTTCTCTGACATACTCAACAAACAAAACGGAACTTTTCATTTCAAAGGTCCTACTTTCAGCAGCCTCAACTGCATAATCACTTCCGATCCTCGAAACCTCGAACACCTTCTCAAAACCAAGTTCATCAACTTTCCTAAAGGAACTTACTTCAGAAGCACGGCAAGAGACTTACTTGGAGACGGTATATTCAACGCCGACGACGAAAAATGGCAGAAGCAAAGAAAAACAGCGAGCATTGAGTTTCATTCAACGAAGTTCAGGAGTTTAACAACTGATTCTTTATTTCACCTTGTTCATTCAAGGCTTTTACCTGTTCTAGAGGATTCAGTTGATAAAAGAGTTGTTGTAGATCTTCAAGACATTCTTTTAAGGTTAACTTTTGATAATGTTTGTATGATAGCTTTTGGTGTTGATCCAGGTTGTTTGAGTCAAAATCTTCCTGTTATACCATTTGCAAGAGCCTTTGAAGATGCAACAGAAGCGACCATGTTTCGTTTTGTTACGCCGACGTGTGTTTGGAAGTTTATGAGGCTTTTCAACTTAGGCACAGAGAGAAAACTCAAGAGATCAATCAAAGGGGTTGATGAGTTTGCTATGAATGTTATTAGGACTAGAAAAAAGGAACTGTCTTTGGAATTTGAGGACAAGAAATCACAGAAATCTGATCTGTTAACTGTTTTTATGAAGATGAAAGATGAGAATGGAAGTGCTTATTCAGATAAGTTCTTGAGAGATATATGTGTGAATTTTATATTAGCTGGGAGAGACACTTCTTCTGTTGCTTTGAGTTGGTTTTTCTGGTTGCTTGATAAGAATCATGAAGTGGAGGAGAAGATTTTAGAAGAGATATGCAAAGTGGTGAGTCAAAGAAATGATATGAAGAAGGATGTGTTTGGAAATTCTTTGATATTTAGGCCTGAAGAGATTAAAAAAATGGATTATTTGCATGCTTGTTTATCAGAAACTCTCAGATTATACCCTTCTGTTCCAGTGGATCACAAAGAGGTAGTTGAGGATGATAGGTTCCCAGATGGAACAGAACTAAAAAAAGGAACAAAAGTGATATATGCAATATATGCAATGGGGAGAATGGAAAGCATATGGGGGAAAGATTGCAGGGAGTTTAAGCCAGAAAGATGGTTAAAAGATGGAAAATTTATGAGTGAATCTGCATACAAATTCACTGCATTTAATGGTGGACCTCGTTTGTGTTTAGGCAAAGATTTTGCTTATTATCAGATGAAATATGTTGCTGCTAGTATCATATTTAGGTATCATGTGAAGGTTGTTGAGAATCACATTGTGGAGCCAAAGATTGCATTGACTATGTATATGAAACATGGGATCAAGGTTAATCTTTGTAAGAGGGGTGATGATGAAATTGGAAAATACTTGGATTTGGTCATTGGTGAAAATTAA 1707 0.3726 MHFHIPYLSNTMTNLNLSSSSSSSSSSPFAADFNMVYSLILFIFQNIQTLEILIAITIFIIIHSLKQKNHHGLPIWPFLGMLPSLLNGLRTNLYEWFSDILNKQNGTFHFKGPTFSSLNCIITSDPRNLEHLLKTKFINFPKGTYFRSTARDLLGDGIFNADDEKWQKQRKTASIEFHSTKFRSLTTDSLFHLVHSRLLPVLEDSVDKRVVVDLQDILLRLTFDNVCMIAFGVDPGCLSQNLPVIPFARAFEDATEATMFRFVTPTCVWKFMRLFNLGTERKLKRSIKGVDEFAMNVIRTRKKELSLEFEDKKSQKSDLLTVFMKMKDENGSAYSDKFLRDICVNFILAGRDTSSVALSWFFWLLDKNHEVEEKILEEICKVVSQRNDMKKDVFGNSLIFRPEEIKKMDYLHACLSETLRLYPSVPVDHKEVVEDDRFPDGTELKKGTKVIYAIYAMGRMESIWGKDCREFKPERWLKDGKFMSESAYKFTAFNGGPRLCLGKDFAYYQMKYVAASIIFRYHVKVVENHIVEPKIALTMYMKHGIKVNLCKRGDDEIGKYLDLVIGEN 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03047 568 PANTHER CYTOCHROME P450 61 546 - -
Vivi5g03047 568 CDD CYP86A 108 544 - -
Vivi5g03047 568 Gene3D Cytochrome P450 60 558 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03047 568 Pfam Cytochrome P450 74 536 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03047 568 SUPERFAMILY Cytochrome P450 72 552 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03047 568 PRINTS P450 superfamily signature 413 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03047 568 PRINTS P450 superfamily signature 500 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03047 568 PRINTS P450 superfamily signature 349 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03047 568 PRINTS P450 superfamily signature 491 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03047 568 FunFam Cytochrome P450 64 555 - -
Vivi5g03047 568 PRINTS E-class P450 group I signature 338 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03047 568 PRINTS E-class P450 group I signature 500 523 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03047 568 PRINTS E-class P450 group I signature 490 500 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03047 568 PRINTS E-class P450 group I signature 358 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03047 568 PRINTS E-class P450 group I signature 412 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi5g03047 568 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 493 502 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03047 Vivi-Chr5 118839956 118842578 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03047 41 560 Cytochrome P450 AT5G23190 73.004 0.0 801
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03047 K15402 - gmx:100809503 852.432