Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03026 ATGTCGCGCCAGTCGACGGGTTCCGCTTTCACCAAATCCAAGACCCTCGACAACAAATATATGCTGGGAGATGAGATTGGGAAAGGAGCTTATGGTCGAGTTTACAAAGGTTTGGACCTGGAGAATGGAGATTTTGTTGCAATTAAGCAAGTTTCTTTGGAGAATATTGCTCAGGAAGATCTCAACATCATCATGAATTTGAACCACAAAAACATTGTAAAGTATCTTGGATCTTTGAAGACAAAGAGTCACCTGCATATAGTACTTGAGTATGTGGAGAACGGCTCACTTGCAAATATTATCAAGCCAAATAAATTTGGACCCTTTCCAGAATCTTTGGTTGCAGTTTATATTGCCCAGGTGTTGGAAGGCTTGGTTTACCTACACGAACAAGGTGTTATCCATCGTGATATTAAGGGTGCAAATATATTGACAACTAAAGAGGGTCTTGTCAAACTTGCTGATTTTGGCGTTGCAACAAAATTAACAGAGGCTGATGTTAATACTCATTCCGTTGTTGGAACACCATACTGGATGGCACCAGAGGTTATAGAAATGTCTGGGGTTTGTGCAGCTTCTGACATTTGGAGTGTTGGCTGTACAGTTATTGAGCTTCTTACATGCGTGCCTCCTTATTATGATTTGCAGCCTATGCCAGCTCTTTTCCGTATTGTCCAGGATGAACACCCTCCAATTCCTGATAGTCTTTCGCCTGACATTACTGATTTTCTGCATCAATGCTTTAAGAAGGATGCTAGACAAAGACCTGATGCTAAAACGCTGTTGTCTCACCCCTGGATTCAAAACTGCAGACGTGCCCTGCAGTCTTCTCTTCGTCATAGTGGATCATTAAGAAATATAGAGGAAGATGATGCTGCAGATGGAAAAGTTTCTGGTGGTGATCGTAAGCTTGCAGGTGAAAACTCTTCTGTGGAGAAACAGGGCACTGTGGCTGCTGATAGCAGCAGATCTCAAGAGGAAAGTGCCTCAGATTCTAATTTTCCCAACGAAAGAACTGAAAAGGCAGATGATTTCTCATCTGATGAGGTTTTTACCTTAGCCATTCACGAGAAGTCCTTTCAACAAACTGGTTCTGGCAAACTCTCTCATGATGGAGAAGTGGGTAGTTCTGAGCCTACTGGTAATCATGAAATTTCAAATGCCAAAGAACTTCATGAAGTCACGATGAATGGAGAAGTTGGATCACCACAGTCAAGAGGAGTGGCTAATAAAGTTGGAGTAAAAGACAGTTCTATCAATAATGGCAAAAAATCATTTGCTTTTGGACCAAGAGGACTTGATAAAGGTCCCACAAAGGCTATGAAGATACTGCACTCTGCAGAAGGAAATGAGCTGAGCAAATTTAGTGACCCTCCGGGAGATGCCTACTTGGATGATTTATTTCCTTTAGACAAACGACATGGGGAGGTTGTAGGTGAGGCATCCACTTCTGCATCAACTTCACACATGGCAAAAGGCAATGTATCTTCGATTGACGGAGGAGAAAAAGACCTGGCCAAAGAGCTGAGGGCTACAATCGCAAGAAAGCAATGGGAGAAAGAGAGTGAAATTGGACAGGCAAACAACGGTGGGAACCTTTTACACCGAGTTATGATAGGTGTTCTAAAAGACGATGTGATTGATATAGATGGTTTGGTATTTGATGAAAAACTTCCTGGAGAGAACCTTTTTCCTCTGCAGGCCGTTGAGTTTAGCAAATTAGTTGGTTCATTAAAGCCCGAGGAATCAGAAGATGTGATTGTCTCTGCCTGTCAGAAACTCATTGGTATATTTCAGCAGCGCTCAGAGCAGAAGCTTGTTTTTGTTACCCAGCATGGTTTACTTCCTCTAACTGACTTGCTTGAAGTTCCTAAAACACGTGTCATATGTTCTGTGCTTCAGCTTATAAATCAAATAATTAAAGACAACACTGATTTTCAAGAAAATGCTTGTCTTGTTGGATTGATTCCTGCAGTCATGAGCTTTGCTGTACCTGATCGTCCCCGGGATATTCGTATGGAAGCAGCTTTTTTTTTACAGCAGCTTTGTCAGTCAAGTTCTTTGACGTTACAAATGTTTATAGCTTGCCGTGGAATACCTGTTTTGGTGGGATTTCTCGAAGCTGATTATGCCAAGTACAGGGAAATGGTTCATCTGGCTATTGATGGCATGTGGCAGGTATTTAAGCTTCAGCAGTCAACGCCTAGAAATGATTTTTGTCGGATAGCTGCAAAAAACGGCATACTCCTTAGGCTTATAAATACACTTTATAGCTTAAATGAGTCAACCCGGTTAGCATCTATGTCTGTTGGGGGAGGATTTTTAGTTGATGGTCCGATTCCACGACCACGGTCTGGTATCTTGGATCCTACTCATCCTTTTTCAATTCAGAACGAGGCACTGCTGTCTTCAGCAGATCAGCAAGATCTTTCTAAATTAAGGCGTGGAGTTCTTGATCATCACTTAGAGCCTTCACATTCTTCATCATCCAATCCTAGAAGATCAGATGCTAACTACCAAATGGATGTTGATAGACCTCAATCAAGCAATGCTGCAGCTGAAGCTGTGCCACTAGAAAAGAGTTCAAATCTTGCTTCCAGGGAATCTTCAGCAGGTACAATGAAAGAAAGAGAGAATGTCGATCGTTGGAAAAGTGATCCTTCTAGAACTGATGTTGAACTAAGACAGCAACGTCTTAGTGTTTCTGCCAACAGGACATCAACAGAAAGGCCTACAAAGTTGACAGAAGCGTCCTCAAACGGGTTATCAGTAACAGGAGCAACTCAGCAAGAGCAAGTTAGGCCTCTTCTTAGCTTGTTGGAGAAAGAGCCCCCGTCTGGACGTTTATCTGGACAGCTTGAATATGTACGTCAGTTTTCAGCGTTAGAAAGACATGAAAGTGTACTCCCTTTGTTACACGCTTCTGAGAAGAAAACAAATGGTGAACTAGACTTTTTGATGGCAGAATTCGCAGATGTTTCTCAACGTGGAAGGGAAAACGGAAATCTTGACTCCAGTGCTAGAGTGTCTCAAAGAGTTGCTCCCAAGAAATTAGGGACTTTTGGTTCTAGTGAAGGAGCTGCTTCCACATCTGGGATCGCATCTCAGACAGCATCAGGTGTATTGTCTGGTTCAGGTGTTCTAAATGCTAGACCAGGTAGTGCTACTTCATCTGGACTACTTTCCCACATGGTTTCATCATTGAATGCAGAAGTTGCAAAAGAGTACCTTGAAAAAGTGGCAGATCTTTTGCTTGAGTTTGCACAAGCGGATACAACGGTGAAGTCTTATATGTGTAGTCAAAGCTTGCTTAGTCGACTTTTCCAGATGTTTAATAGGGTAGAACCACCTATTTTGTTAAAGATACTGAAGTGTATTAATCACCTGTCAACTGATCCAAATTGCTTAGAAAATCTTCAGCGTGCTGAGGCAATCAAATACTTGATACCAAACCTTGAACTCAAAGAAGGGTCTCTTGTATCAGAGATACATCATGAAGTCCTGAATGCACTGTTCAACTTATGCAAGATAAATAAGAGGAGACAGGAACAAGCAGCTGAAAATGGAATCATTCCCCATCTAATGCAATTCATTACATCAAATTCTCCCTTGAAACAATATGCATTGCCTCTGTTGTGTGACATGGCGCATGCATCTCGTAACTCAAGGGAGCAGTTAAGGGCTCATGGTGGTTTGGATGTCTATTTAAACCTTCTTGAGGATGAGTTTTGGTCTGTGACTGCACTAGATTCAATTGCTGTTTGCTTAGCCCATGACAATGATAATAGGAAGGTTGAACAAGCATTGCTGAAGAAAGATGCAGTTCAGAAGCTGGTGATGTTCTTCCAGAGCTGTCCAGAGCAGCATTTTGTACACATATTGGAGCCGTTCTTGAAAATCATCACAAAATCTGCAAGGATCAACACCACTTTGGCTGTTAATGGATTAACGCCATTACTCATTGCTAGGCTGGATCATCAAGATGCTATAGCTCGTCTTAATTTACTCAGGCTAATAAAGGCTGTTTATGAACATCACCCTCAGCCCAAGAAACTGATTGTGGAGAACGATCTACCTGAGAAACTTCAAAACTTAATAGGGGAACGCAGAGATGGCCAAGTGTTGGTCAAACAGATGGCAACTTCATTACTTAAAGCATTACATATAAACACTGTTTTGTAA 4182 0.4182 MSRQSTGSAFTKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMNLNHKNIVKYLGSLKTKSHLHIVLEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDEHPPIPDSLSPDITDFLHQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGSLRNIEEDDAADGKVSGGDRKLAGENSSVEKQGTVAADSSRSQEESASDSNFPNERTEKADDFSSDEVFTLAIHEKSFQQTGSGKLSHDGEVGSSEPTGNHEISNAKELHEVTMNGEVGSPQSRGVANKVGVKDSSINNGKKSFAFGPRGLDKGPTKAMKILHSAEGNELSKFSDPPGDAYLDDLFPLDKRHGEVVGEASTSASTSHMAKGNVSSIDGGEKDLAKELRATIARKQWEKESEIGQANNGGNLLHRVMIGVLKDDVIDIDGLVFDEKLPGENLFPLQAVEFSKLVGSLKPEESEDVIVSACQKLIGIFQQRSEQKLVFVTQHGLLPLTDLLEVPKTRVICSVLQLINQIIKDNTDFQENACLVGLIPAVMSFAVPDRPRDIRMEAAFFLQQLCQSSSLTLQMFIACRGIPVLVGFLEADYAKYREMVHLAIDGMWQVFKLQQSTPRNDFCRIAAKNGILLRLINTLYSLNESTRLASMSVGGGFLVDGPIPRPRSGILDPTHPFSIQNEALLSSADQQDLSKLRRGVLDHHLEPSHSSSSNPRRSDANYQMDVDRPQSSNAAAEAVPLEKSSNLASRESSAGTMKERENVDRWKSDPSRTDVELRQQRLSVSANRTSTERPTKLTEASSNGLSVTGATQQEQVRPLLSLLEKEPPSGRLSGQLEYVRQFSALERHESVLPLLHASEKKTNGELDFLMAEFADVSQRGRENGNLDSSARVSQRVAPKKLGTFGSSEGAASTSGIASQTASGVLSGSGVLNARPGSATSSGLLSHMVSSLNAEVAKEYLEKVADLLLEFAQADTTVKSYMCSQSLLSRLFQMFNRVEPPILLKILKCINHLSTDPNCLENLQRAEAIKYLIPNLELKEGSLVSEIHHEVLNALFNLCKINKRRQEQAAENGIIPHLMQFITSNSPLKQYALPLLCDMAHASRNSREQLRAHGGLDVYLNLLEDEFWSVTALDSIAVCLAHDNDNRKVEQALLKKDAVQKLVMFFQSCPEQHFVHILEPFLKIITKSARINTTLAVNGLTPLLIARLDHQDAIARLNLLRLIKAVYEHHPQPKKLIVENDLPEKLQNLIGERRDGQVLVKQMATSLLKALHINTVL 1393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03026 1393 MobiDBLite consensus disorder prediction 360 384 - -
Vivi5g03026 1393 ProSiteProfiles Protein kinase domain profile. 20 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g03026 1393 CDD STKc_Cdc7_like 19 267 - -
Vivi5g03026 1393 Gene3D Transferase(Phosphotransferase) domain 1 17 298 - -
Vivi5g03026 1393 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Vivi5g03026 1393 Pfam Protein kinase domain 21 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g03026 1393 MobiDBLite consensus disorder prediction 871 893 - -
Vivi5g03026 1393 SUPERFAMILY ARM repeat 572 767 IPR016024 -
Vivi5g03026 1393 MobiDBLite consensus disorder prediction 821 930 - -
Vivi5g03026 1393 FunFam MAP3K epsilon protein kinase 1 565 779 - -
Vivi5g03026 1393 Gene3D - 563 778 IPR011989 -
Vivi5g03026 1393 SUPERFAMILY Protein kinase-like (PK-like) 17 268 IPR011009 -
Vivi5g03026 1393 MobiDBLite consensus disorder prediction 480 499 - -
Vivi5g03026 1393 MobiDBLite consensus disorder prediction 480 494 - -
Vivi5g03026 1393 MobiDBLite consensus disorder prediction 894 930 - -
Vivi5g03026 1393 FunFam MAP3K epsilon protein kinase 1-like 1047 1388 - -
Vivi5g03026 1393 MobiDBLite consensus disorder prediction 285 301 - -
Vivi5g03026 1393 MobiDBLite consensus disorder prediction 823 847 - -
Vivi5g03026 1393 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 17 715 - -
Vivi5g03026 1393 MobiDBLite consensus disorder prediction 285 344 - -
Vivi5g03026 1393 SMART arm_5 1178 1217 IPR000225 GO:0005515
Vivi5g03026 1393 SMART arm_5 1132 1176 IPR000225 GO:0005515
Vivi5g03026 1393 SMART arm_5 601 641 IPR000225 GO:0005515
Vivi5g03026 1393 PRINTS Tyrosine kinase catalytic domain signature 236 258 IPR001245 GO:0004672|GO:0006468
Vivi5g03026 1393 PRINTS Tyrosine kinase catalytic domain signature 89 102 IPR001245 GO:0004672|GO:0006468
Vivi5g03026 1393 PRINTS Tyrosine kinase catalytic domain signature 127 145 IPR001245 GO:0004672|GO:0006468
Vivi5g03026 1393 PRINTS Tyrosine kinase catalytic domain signature 193 215 IPR001245 GO:0004672|GO:0006468
Vivi5g03026 1393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Vivi5g03026 1393 FunFam MAP3K epsilon protein kinase 1 17 298 - -
Vivi5g03026 1393 Gene3D - 1047 1390 IPR011989 -
Vivi5g03026 1393 SMART serkin_6 20 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g03026 1393 MobiDBLite consensus disorder prediction 309 332 - -
Vivi5g03026 1393 SUPERFAMILY ARM repeat 1060 1386 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03026 Vivi-Chr5 118472667 118502297 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03026 1 1393 MAP Kinase Kinase Kinase AT3G13530 71.158 0.0 1959
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Vivi5g03026 Pkinase 4.4e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03026 - - gmx:100813256 2377.82