Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03025 ATGTCGCGCCAGTCGACGGGTTCCGCTTTCACCAAATCCAAGACCCTCGACAACAAATATATGCTGGGAGATGAGATTGGGAAAGGAGCTTATGGTCGAGTTTACAAAGGTTTGGACCTGGAGAATGGAGATTTTGTTGCAATTAAGCAAGTTTCTTTGGAGAATATTGCTCAGGAAGATCTCAACATCATCATGCAAGAGATTGATTTGTTAAAGAATTTGAACCACAAAAACATTGTAAAGTATCTTGGATCTTTGAAGACAAAGAGTCACCTGCATATAGTACTTGAGTATGTGGAGAACGGCTCACTTGCAAATATTATCAAGCCAAATAAATTTGGACCCTTTCCAGAATCTTTGGTTGCAGTTTATATTGCCCAGGTGTTGGAAGGCTTGGTTTACCTACACGAACAAGGTGTTATCCATCGTGATATTAAGGGTGCAAATATATTGACAACTAAAGAGGGTCTTGTCAAACTTGCTGATTTTGGCGTTGCAACAAAATTAACAGAGGCTGATGTTAATACTCATTCCGTTGTTGGAACACCATACTGGATGGCACCAGAGGTTATAGAAATGTCTGGGGTTTGTGCAGCTTCTGACATTTGGAGTGTTGGCTGTACAGTTATTGAGCTTCTTACATGCGTGCCTCCTTATTATGATTTGCAGCCTATGCCAGCTCTTTTCCGTATTGTCCAGGATGAACACCCTCCAATTCCTGATAGTCTTTCGCCTGACATTACTGATTTTCTGCATCAATGCTTTAAGAAGGATGCTAGACAAAGACCTGATGCTAAAACGCTGTTGTCTCACCCCTGGATTCAAAACTGCAGACGTGCCCTGCAGTCTTCTCTTCGTCATAGTGGATCATTAAGAAATATAGAGGAAGATGATGCTGCAGATGGAAAAGTTTCTGGTGGTGATCGTAAGCTTGCAGGTGAAAACTCTTCTGTGGAGAAACAGGGCACTGTGGCTGCTGATAGCAGCAGATCTCAAGAGGAAAGTGCCTCAGATTCTAATTTTCCCAACGAAAGAACTGAAAAGGCAGATGATTTCTCATCTGATGAGGTTTTTACCTTAGCCATTCACGAGAAGTCCTTTCAACAAACTGGTTCTGGCAAACTCTCTCATGATGGAGAAGTGGGTAGTTCTGAGCCTACTGGTAATCATGAAATTTCAAATGCCAAAGAACTTCATGAAGTCACGATGAATGGAGAAGTTGGATCACCACAGTCAAGAGGAGTGGCTAATAAAGTTGGAGTAAAAGACAGTTCTATCAATAATGGCAAAAAATCATTTGCTTTTGGACCAAGAGGACTTGATAAAGGTCCCACAAAGGCTATGAAGATACTGCACTCTGCAGAAGGAAATGAGCTGAGCAAATTTAGTGACCCTCCGGGAGATGCCTACTTGGATGATTTATTTCCTTTAGACAAACGACATGGGGAGGTTGTAGGTGAGGCATCCACTTCTGCATCAACTTCACACATGGCAAAAGGCAATGTATCTTCGATTGACGGAGGAGAAAAAGACCTGGCCAAAGAGCTGAGGGCTACAATCGCAAGAAAGCAATGGGAGAAAGAGAGTGAAATTGGACAGGCAAACAACGGTGGGAACCTTTTACACCGAGTTATGATAGGTGTTCTAAAAGACGATGTGATTGATATAGATGGTTTGGTATTTGATGAAAAACTTCCTGGAGAGAACCTTTTTCCTCTGCAGGCCGTTGAGTTTAGCAAATTAGTTGGTTCATTAAAGCCCGAGGAATCAGAAGATGTGATTGTCTCTGCCTGTCAGAAACTCATTGGTATATTTCAGCAGCGCTCAGAGCAGAAGCTTGTTTTTGTTACCCAGCATGGTTTACTTCCTCTAACTGACTTGCTTGAAGTTCCTAAAACACGTGTCATATGTTCTGTGCTTCAGCTTATAAATCAAATAATTAAAGACAACACTGATTTTCAAGAAAATGCTTGTCTTGTTGGATTGATTCCTGCAGTCATGAGCTTTGCTGTACCTGATCGTCCCCGGGATATTCGTATGGAAGCAGCTTTTTTTTTACAGCAGCTTTGTCAGTCAAGTTCTTTGACGTTACAAATGTTTATAGCTTGCCGTGGAATACCTGTTTTGGTGGGATTTCTCGAAGCTGATTATGCCAAGTACAGGGAAATGGTTCATCTGGCTATTGATGGCATGTGGCAGGTATTTAAGCTTCAGCAGTCAACGCCTAGAAATGATTTTTGTCGGATAGCTGCAAAAAACGGCATACTCCTTAGGCTTATAAATACACTTTATAGCTTAAATGAGTCAACCCGGTTAGCATCTATGTCTGTTGGGGGAGGATTTTTAGTTGATGGTCCGATTCCACGACCACGGTCTGGTATCTTGGATCCTACTCATCCTTTTTCAATTCAGAACGAGGCACTGCTGTCTTCAGCAGATCAGCAAGATCTTTCTAAATTAAGGCGTGGAGTTCTTGATCATCACTTAGAGCCTTCACATTCTTCATCATCCAATCCTAGAAGATCAGATGCTAACTACCAAATGGATGTTGATAGACCTCAATCAAGCAATGCTGCAGCTGAAGCTGTGCCACTAGAAAAGAGTTCAAATCTTGCTTCCAGGGAATCTTCAGCAGGTACAATGAAAGAAAGAGAGAATGTCGATCGTTGGAAAAGTGATCCTTCTAGAACTGATGTTGAACTAAGACAGCAACGTCTTAGTGTTTCTGCCAACAGGACATCAACAGAAAGGCCTACAAAGTTGACAGAAGCGTCCTCAAACGGGTTATCAGTAACAGGAGCAACTCAGCAAGAGCAAGTTAGGCCTCTTCTTAGCTTGTTGGAGAAAGAGCCCCCGTCTGGACGTTTATCTGGACAGCTTGAATATGTACGTCAGTTTTCAGCGTTAGAAAGACATGAAAGTGTACTCCCTTTGTTACACGCTTCTGAGAAGAAAACAAATGGTGAACTAGACTTTTTGATGGCAGAATTCGCAGATGTTTCTCAACGTGGAAGGGAAAACGGAAATCTTGACTCCAGTGCTAGAGTGTCTCAAAGAGTTGCTCCCAAGAAATTAGGGACTTTTGGTTCTAGTGAAGGAGCTGCTTCCACATCTGGGATCGCATCTCAGACAGCATCAGGTGTATTGTCTGGTTCAGGTGTTCTAAATGCTAGACCAGGTAGTGCTACTTCATCTGGACTACTTTCCCACATGGTTTCATCATTGAATGCAGAAGTTGCAAAAGAGTACCTTGAAAAAGTGGCAGATCTTTTGCTTGAGTTTGCACAAGCGGATACAACGGTGAAGTCTTATATGTGTAGTCAAAGCTTGCTTAGTCGACTTTTCCAGATGTTTAATAGGGTAGAACCACCTATTTTGTTAAAGATACTGAAGTGTATTAATCACCTGTCAACTGATCCAAATTGCTTAGAAAATCTTCAGCGTGCTGAGGCAATCAAATACTTGATACCAAACCTTGAACTCAAAGAAGGGTCTCTTGTATCAGAGATACATCATGAAGTCCTGAATGCACTGTTCAACTTATGCAAGATAAATAAGAGGAGACAGGAACAAGCAGCTGAAAATGGAATCATTCCCCATCTAATGCAATTCATTACATCAAATTCTCCCTTGAAACAATATGCATTGCCTCTGTTGTGTGACATGGCGCATGCATCTCGTAACTCAAGGGAGCAGTTAAGGGCTCATGGTGGTTTGGATGTCTATTTAAACCTTCTTGAGGATGAGTTTTGGTCTGTGACTGCACTAGATTCAATTGCTGTTTGCTTAGCCCATGACAATGATAATAGGAAGGTTGAACAAGCATTGCTGAAGAAAGATGCAGTTCAGAAGCTGGTGATGTTCTTCCAGAGCTGTCCAGAGCAGCATTTTGTACACATATTGGAGCCGTTCTTGAAAATCATCACAAAATCTGCAAGGATCAACACCACTTTGGCTGTTAATGGATTAACGCCATTACTCATTGCTAGGCTGGATCATCAAGATGCTATAGCTCGTCTTAATTTACTCAGGCTAATAAAGGCTGTTTATGAACATCACCCTCAGCCCAAGAAACTGATTGTGGAGAACGATCTACCTGAGAAACTTCAAAACTTAATAGGGGAACGCAGAGATGGCCAAGTGTTGGTCAAACAGATGGCAACTTCATTACTTAAAGCATTACATATAAACACTGTTTTGTAA 4203 0.4176 MSRQSTGSAFTKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKTKSHLHIVLEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDEHPPIPDSLSPDITDFLHQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGSLRNIEEDDAADGKVSGGDRKLAGENSSVEKQGTVAADSSRSQEESASDSNFPNERTEKADDFSSDEVFTLAIHEKSFQQTGSGKLSHDGEVGSSEPTGNHEISNAKELHEVTMNGEVGSPQSRGVANKVGVKDSSINNGKKSFAFGPRGLDKGPTKAMKILHSAEGNELSKFSDPPGDAYLDDLFPLDKRHGEVVGEASTSASTSHMAKGNVSSIDGGEKDLAKELRATIARKQWEKESEIGQANNGGNLLHRVMIGVLKDDVIDIDGLVFDEKLPGENLFPLQAVEFSKLVGSLKPEESEDVIVSACQKLIGIFQQRSEQKLVFVTQHGLLPLTDLLEVPKTRVICSVLQLINQIIKDNTDFQENACLVGLIPAVMSFAVPDRPRDIRMEAAFFLQQLCQSSSLTLQMFIACRGIPVLVGFLEADYAKYREMVHLAIDGMWQVFKLQQSTPRNDFCRIAAKNGILLRLINTLYSLNESTRLASMSVGGGFLVDGPIPRPRSGILDPTHPFSIQNEALLSSADQQDLSKLRRGVLDHHLEPSHSSSSNPRRSDANYQMDVDRPQSSNAAAEAVPLEKSSNLASRESSAGTMKERENVDRWKSDPSRTDVELRQQRLSVSANRTSTERPTKLTEASSNGLSVTGATQQEQVRPLLSLLEKEPPSGRLSGQLEYVRQFSALERHESVLPLLHASEKKTNGELDFLMAEFADVSQRGRENGNLDSSARVSQRVAPKKLGTFGSSEGAASTSGIASQTASGVLSGSGVLNARPGSATSSGLLSHMVSSLNAEVAKEYLEKVADLLLEFAQADTTVKSYMCSQSLLSRLFQMFNRVEPPILLKILKCINHLSTDPNCLENLQRAEAIKYLIPNLELKEGSLVSEIHHEVLNALFNLCKINKRRQEQAAENGIIPHLMQFITSNSPLKQYALPLLCDMAHASRNSREQLRAHGGLDVYLNLLEDEFWSVTALDSIAVCLAHDNDNRKVEQALLKKDAVQKLVMFFQSCPEQHFVHILEPFLKIITKSARINTTLAVNGLTPLLIARLDHQDAIARLNLLRLIKAVYEHHPQPKKLIVENDLPEKLQNLIGERRDGQVLVKQMATSLLKALHINTVL 1400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03025 1400 MobiDBLite consensus disorder prediction 828 937 - -
Vivi5g03025 1400 PRINTS Tyrosine kinase catalytic domain signature 134 152 IPR001245 GO:0004672|GO:0006468
Vivi5g03025 1400 PRINTS Tyrosine kinase catalytic domain signature 96 109 IPR001245 GO:0004672|GO:0006468
Vivi5g03025 1400 PRINTS Tyrosine kinase catalytic domain signature 200 222 IPR001245 GO:0004672|GO:0006468
Vivi5g03025 1400 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Vivi5g03025 1400 FunFam MAP3K epsilon protein kinase 1 572 786 - -
Vivi5g03025 1400 MobiDBLite consensus disorder prediction 316 339 - -
Vivi5g03025 1400 Gene3D - 570 785 IPR011989 -
Vivi5g03025 1400 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g03025 1400 MobiDBLite consensus disorder prediction 901 937 - -
Vivi5g03025 1400 CDD STKc_Cdc7_like 19 274 - -
Vivi5g03025 1400 MobiDBLite consensus disorder prediction 367 391 - -
Vivi5g03025 1400 SUPERFAMILY ARM repeat 579 774 IPR016024 -
Vivi5g03025 1400 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 17 722 - -
Vivi5g03025 1400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Vivi5g03025 1400 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g03025 1400 FunFam MAP3K epsilon protein kinase 1 17 305 - -
Vivi5g03025 1400 SUPERFAMILY ARM repeat 1067 1393 IPR016024 -
Vivi5g03025 1400 MobiDBLite consensus disorder prediction 292 351 - -
Vivi5g03025 1400 FunFam MAP3K epsilon protein kinase 1-like 1054 1395 - -
Vivi5g03025 1400 MobiDBLite consensus disorder prediction 878 900 - -
Vivi5g03025 1400 Pfam Protein kinase domain 21 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g03025 1400 SMART arm_5 1185 1224 IPR000225 GO:0005515
Vivi5g03025 1400 SMART arm_5 608 648 IPR000225 GO:0005515
Vivi5g03025 1400 SMART arm_5 1139 1183 IPR000225 GO:0005515
Vivi5g03025 1400 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Vivi5g03025 1400 MobiDBLite consensus disorder prediction 830 854 - -
Vivi5g03025 1400 Gene3D - 1054 1397 IPR011989 -
Vivi5g03025 1400 MobiDBLite consensus disorder prediction 292 308 - -
Vivi5g03025 1400 Gene3D Transferase(Phosphotransferase) domain 1 17 305 - -
Vivi5g03025 1400 SUPERFAMILY Protein kinase-like (PK-like) 17 275 IPR011009 -
Vivi5g03025 1400 MobiDBLite consensus disorder prediction 487 506 - -
Vivi5g03025 1400 MobiDBLite consensus disorder prediction 487 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03025 Vivi-Chr5 118472667 118502297 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03025 1 1400 MAP Kinase Kinase Kinase AT3G13530 71.649 0.0 1977
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Vivi5g03025 Pkinase 4.6e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03025 - - gmx:100813256 2397.47