Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03014 ATGGCGTTTCGCTTGCCATTGGTAATGCAAGCAAAGAAGCATATCCTCCGCCTCACACTTTCAAAAGGTAAAAAAGTGTTGTCAGCTAATAGTAATATACCAAAAGGATATTTGGCAGTATATGTTGGAGAAGAGAAAAAAAAGAGATTTGTGGTTCCAATATCATATTTGCATCAACCTGCTTTTCAACAATTTCTTTGTAAAGCTGAAGAAGAATTTGGATTTAATCATCCAATGGGTGGTCTCACCATTCCTTGCAGAGAAGAGATCTTTGTTAATGTAACTTCTCAATTGGAAAGTTAA 303 0.3564 MAFRLPLVMQAKKHILRLTLSKGKKVLSANSNIPKGYLAVYVGEEKKKRFVVPISYLHQPAFQQFLCKAEEEFGFNHPMGGLTIPCREEIFVNVTSQLES 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03014 100 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 26 98 IPR003676 GO:0009733
Vivi5g03014 100 Pfam Auxin responsive protein 22 96 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03014 Vivi-Chr5 118336235 118336869 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03014 32 91 Calmodulin-binding Proteins AT3G43120 55.000 1.45e-16 68.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03014 5 118336235 118336869 Vivi5g03014 5 118336235 118336869 ECH