Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03011 ATGGCATTTCGCTTGCCATTGATAATGCAGGCTAAGAGGCATATCCTTCGCCGCACACTTTCAAAAGGTGAGAAAATGTTGTCAGGTAATAGTAATATACCAAAAGGGTATTTAGCAGTATATGTTGGAGTAGAGAACAAGAAGAGATTTGTGGTTCCAATATCATATTTGCATCAACCTGCTTTTCAACAATTTCTTTGTAAAGCTGAACAAGAGTTTGGATTTAATCATCCAATGGGCGGCCTCACCATTCCTTGCAGAGAAGACGTCTTTCTTAATGTCACCTCTCAATTGGAAAGTTAA 303 0.3861 MAFRLPLIMQAKRHILRRTLSKGEKMLSGNSNIPKGYLAVYVGVENKKRFVVPISYLHQPAFQQFLCKAEQEFGFNHPMGGLTIPCREDVFLNVTSQLES 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03011 100 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 25 98 IPR003676 GO:0009733
Vivi5g03011 100 Coils Coil 98 100 - -
Vivi5g03011 100 Pfam Auxin responsive protein 25 96 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03011 Vivi-Chr5 118322708 118323010 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03011 32 91 Calmodulin-binding Proteins AT3G43120 51.667 1.04e-15 66.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03011 5 118322708 118323010 Vivi5g03011 5 118322708 118323010 ECH