Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02983 ATGGGTCCCAAAAAGGGTGTTAAAGCTTCAGTTGCAGCTTCCAAGAAGAAGCCAGAGAAGGTTACAAACCCACTTTTCGAGAAACGCCCAAAGCAATTTGGAATTGGTGGTGCATTGCCTCCTAAGAGGGATTTGACTAGATTTGTGAAGTGGCCAAAGACTGTTCAGATTCAGAGGAAAAAGAGAATTTTGAAACAGAGGTTGAAGGTTCCCCCAGCTTTGAACCAGTTCACTAAAACTCTTGACAAAAACCTAGCAACAAGCCTGTTCAAGATTCTTCTGAAGTACAGGCCTGAGGACAAAGCAGAAAAGAAGGAGAGGCTTTTGAAAAGGGCTCAGGCAGAGACTGAGGGTAAAACAGTTGAGACCAAGAAGCCTATCAATGTCAAGTATGGTCTCAATCATGTTACCTACCTCATTGAGCAGAATAAAGCCCAGCTTGTTGTGATAGCTCATGATGTTGACCCAATTGAATTGGTTGTCTGGCTTCCAGCATTGTGCAGGAAGATGGAAATTCCATATTGTATTGTCAAGGGCAAGGCTCGCCTTGGAACTGTTGTCCATAAGAAAACTGCAGCTGTTTTGTGCTTGACAACTGTTAAAAATGAAGATAAAATGGAGTTTAGCAGGGTCCTTGAAGCAATCAAGGCAAACTTCAATGACAAGTATGAAGAATACAGGAAGAAGTGGGGTGGTGGAATCATGGGTTCCAAATCCCAAGCCAAAACCAAGGCAAAGGAAAGGCTTATTGCCAAGGAAGCTGCCCAGAGGATGACTTAG 780 0.4346 MGPKKGVKASVAASKKKPEKVTNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKTVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATSLFKILLKYRPEDKAEKKERLLKRAQAETEGKTVETKKPINVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGTVVHKKTAAVLCLTTVKNEDKMEFSRVLEAIKANFNDKYEEYRKKWGGGIMGSKSQAKTKAKERLIAKEAAQRMT 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02983 259 PRINTS Ribosomal protein L7A family signature 47 64 IPR001921 -
Vivi5g02983 259 PRINTS Ribosomal protein L7A family signature 30 47 IPR001921 -
Vivi5g02983 259 PRINTS Ribosomal protein L7A family signature 125 145 IPR001921 -
Vivi5g02983 259 PRINTS Ribosomal protein L7A family signature 67 86 IPR001921 -
Vivi5g02983 259 PRINTS Ribosomal protein L7A family signature 91 104 IPR001921 -
Vivi5g02983 259 PRINTS Ribosomal protein L7A family signature 186 210 IPR001921 -
Vivi5g02983 259 PRINTS Ribosomal protein L7A family signature 218 238 IPR001921 -
Vivi5g02983 259 SUPERFAMILY L30e-like 89 230 IPR029064 -
Vivi5g02983 259 MobiDBLite consensus disorder prediction 1 27 - -
Vivi5g02983 259 PRINTS Ribosomal protein L7A/RS6 family signature 129 143 IPR018492 -
Vivi5g02983 259 PRINTS Ribosomal protein L7A/RS6 family signature 164 174 IPR018492 -
Vivi5g02983 259 PRINTS Ribosomal protein L7A/RS6 family signature 148 161 IPR018492 -
Vivi5g02983 259 PRINTS Ribosomal protein L7A/RS6 family signature 174 188 IPR018492 -
Vivi5g02983 259 MobiDBLite consensus disorder prediction 12 26 - -
Vivi5g02983 259 FunFam 60S ribosomal protein L7a 51 234 - -
Vivi5g02983 259 ProSitePatterns Ribosomal protein L7Ae signature. 167 184 IPR004037 GO:0042254|GO:1990904
Vivi5g02983 259 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 117 207 IPR004038 -
Vivi5g02983 259 Gene3D - 51 234 IPR029064 -
Vivi5g02983 259 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 43 242 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02983 1 259 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 87.259 2.79e-170 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02983 K02936 - fve:101294198 473.011