Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02964 ATGAAGAGATTCTCTTTTCGGTTTTTCATCATTTATCTACTTTTTCTCTTCTTCACTCCTCAATTAGCTAGATCACAAAACGATGATTCAAAACCACTTTTAGCTCTAAAATCCTCCATTGACATTCACAATAAACTTCCATGGCTACAACAAGTAAACGACGACGTTTGCACTTGGTCAGGTGTTAAAGAGTGTTTCCAAGGAAGAGTTAGAAAGCTAGTACTCGAGTATTTCAACTTAACCGGGAAACTAGATTCAGATATCTTAAACCGTTTGGATCAACTTCGAGTTCTTAGCTTCAAAGGAAACTCACTCTCTGGTCAAATCCCTGATCTCTCAAATCTCGTTAATCTTAAGTCTATTTATCTCAACGATAACGATTTCTCCGGCGAGTTTCCGGTTTCTGTTTCGATTCTTCATAGAGTCAAAGTTATTGTTTTATCCGGTAATAAAATCTCCGGCGAGATTCCGGTGGATTTGCTTAAGCTTTCTCGGCTCTATGTACTGTACTTGCAAGATAATTTGTTTACCGGTTCGATTCCGAGTTTTGACCAAACCGGACTTAAGTATTTGAATGTCTCGAATAATAGACTCTCCGGCGAGATTCCGGTGACATCTGCATTGATTCGGTTTAACGCGTCGTCGTTTTCAGGTAACTTAGAGCTCTGCGGTGAACAGATCCACCGGGAATGTAAAAATAAGACTCTGTTATCGCCACCGCCGGAGGGAGTGGGTCCGGCTGGAGGAAACGCGAAAACGACGTCGTCGAAGTCGAAATCGAACCGTACGAAACTGATAAAGATAATTGGAGGAAGTGTTGGTGGGTTTGTTTTGTTGTTAATTTGCTTGATTTTACTGGTGTGGGTAATTTGCAAGAACCGTAGGAAGAGAGTGGGTTCTTCTGGAGCAAGACGGACCAATAAGGGTAATGCTGACGTGGCAGCTACAGAAGGTGAAAATCCTGGAGAAGGGGAGGGTAGAGGAAGTAATTACGAGGCGAAACAAGGTGGATTTGCTTGGGAAAATGAGGGTATAGGGAAACTGGTGTTCTGCGGAGCAGGGGATCGTGAAATGGGGTATAGTTTAGAGGATTTACTTAAGGCTTCAGCTGAGACATTAGGGAGGGGTATTATGGGAAGTACGTATAAAGCAGTTATGGAATCAGGTTTTATTGTTACTGTTAAGAGGTTGAAAGATGCAAGGTACCCTGGGTTGGAAGAGTTTAGGACACATATTGATTTACTTGGGAAGCTTAGACACCCTAATCTGGTCCCACTTAGGGCTTATTTTCAAGCTAAAGAAGAACGTCTTCTTGTCTATGATTATTTCCCGAATGGAAGCCTCTTCTCTCTTATTCATGGATCGAAAACATCGAATGGGGGAAAACCTCTTCACTGGACATCATGTCTTAAAATCGCAGAAGATCTAGCAACAGGCATTCTCTATATCCACCAAAACCCTGGCATGACACACGGAAACCTGAAATCTTCTAATGTGTTACTTGGTTCCGACTTTGAGTCCTGTCTCACAGATTACGGTCTCAATGTGTTCCTCAATCCCGACACAATGGACGAACCAAGTGCCACTTCTTTTTTCTATAGAGCACCCGAATGCCGCAGTTTTCAGCGGCCGCAAACTCAATCTGCCGATGTATACAGCTTTGGTGTCCTTCTCCTTGAGCTTTTGACAGGCAAAACACCCTATCAAGACCTTGTTCAGGCACACGGCTCAGATATACCTCGATGGGTTAGGTCAGTACGTGAAGAAGAAACCGAGTCCGGAGATGATCCTGCCTCATCAGGCAATGAAGCTTCTGAAGAGAAGCTTCAGGCTCTTTTGAACATTGCAATGGCATGTGTTTCAGTTAGTCCAGAGAATAGACCTACAATGAGAGAAGTTCTAAAGATGATAAGAGATGCAAGAGGGGAAACTCATGTCTCATCTAATAATAGCAGTGATCATTCACCTGGTAGATGGTCAGATACTGTTCAAAGCTTGCCAAGGGATGAACATCTTAGCATATAA 2025 0.4286 MKRFSFRFFIIYLLFLFFTPQLARSQNDDSKPLLALKSSIDIHNKLPWLQQVNDDVCTWSGVKECFQGRVRKLVLEYFNLTGKLDSDILNRLDQLRVLSFKGNSLSGQIPDLSNLVNLKSIYLNDNDFSGEFPVSVSILHRVKVIVLSGNKISGEIPVDLLKLSRLYVLYLQDNLFTGSIPSFDQTGLKYLNVSNNRLSGEIPVTSALIRFNASSFSGNLELCGEQIHRECKNKTLLSPPPEGVGPAGGNAKTTSSKSKSNRTKLIKIIGGSVGGFVLLLICLILLVWVICKNRRKRVGSSGARRTNKGNADVAATEGENPGEGEGRGSNYEAKQGGFAWENEGIGKLVFCGAGDREMGYSLEDLLKASAETLGRGIMGSTYKAVMESGFIVTVKRLKDARYPGLEEFRTHIDLLGKLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSNGGKPLHWTSCLKIAEDLATGILYIHQNPGMTHGNLKSSNVLLGSDFESCLTDYGLNVFLNPDTMDEPSATSFFYRAPECRSFQRPQTQSADVYSFGVLLLELLTGKTPYQDLVQAHGSDIPRWVRSVREEETESGDDPASSGNEASEEKLQALLNIAMACVSVSPENRPTMREVLKMIRDARGETHVSSNNSSDHSPGRWSDTVQSLPRDEHLSI 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02964 674 SUPERFAMILY Protein kinase-like (PK-like) 371 648 IPR011009 -
Vivi5g02964 674 MobiDBLite consensus disorder prediction 300 331 - -
Vivi5g02964 674 Gene3D Ribonuclease Inhibitor 185 235 IPR032675 -
Vivi5g02964 674 FunFam Nuclear pore complex protein NUP107 26 182 - -
Vivi5g02964 674 Gene3D Ribonuclease Inhibitor 28 184 IPR032675 -
Vivi5g02964 674 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 642 IPR046959 -
Vivi5g02964 674 MobiDBLite consensus disorder prediction 642 674 - -
Vivi5g02964 674 Gene3D Transferase(Phosphotransferase) domain 1 443 662 - -
Vivi5g02964 674 ProSiteProfiles Protein kinase domain profile. 367 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi5g02964 674 SUPERFAMILY L domain-like 37 223 - -
Vivi5g02964 674 MobiDBLite consensus disorder prediction 643 674 - -
Vivi5g02964 674 Gene3D Phosphorylase Kinase; domain 1 353 442 - -
Vivi5g02964 674 MobiDBLite consensus disorder prediction 586 605 - -
Vivi5g02964 674 MobiDBLite consensus disorder prediction 234 257 - -
Vivi5g02964 674 Pfam Protein kinase domain 370 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02964 Vivi-Chr5 117996607 118001498 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02964 10 674 Receptor kinase-like Gene Family AT1G60630 61.012 0.0 764
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vivi5g02964 Pkinase 3.8e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02964 - - lja:Lj3g3v3500180.1 1023.46