Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02955 ATGGGCGAAATTCTCAATTCCATTCCTCTCCCACTTGTTTTCTCCATCTTCTTTCTTTTCTTCTTTTCACTTTCCTCAACCCACGTTCTTTCTGCAGAGAATGAACTTCCCAAAACCTTCATCTTTCGCGTTAATTCCTATTCCAAACCCTCCATTTTCCCAACCCATTATCACTGGTACACCGCTGAATTCACTGAACAAACTCATATCCTTCATGTTTATGACACTGTTTTCCATGGCTTCTCTGCTGTGCTCACAAGACAACAAGCTGCTTCCGTAGGTAACCACCCTTCGATTCTTGCAGTTTTCGAGGATCGTCGGAGACAGTTACATACAACTCGTTCACCGCAGTTTCTGGGTCTTCGTAACCAGCGAGGTTTATGGTCTGAATCTGATTATGGCTCTGATGTTATTGTTGGAGTCTTTGACACTGGCATTTGGCCTGAGAGGAGAAGCTTCTCTGATGTGAACTTGGGTCCTATTCCACGGCGGTGGAAAGGGATTTGTGAATCTGGTGAAAAATTCTCACCCAGAAACTGTAACAAAAAACTCATCGGTGCTAGATTCTTCTCCAAAGGCCATGAAGCAGGTTCTGGTTTTTCCGGTCCTTTGAATCCCATCAATGAAACGGTTGAGTTTCGATCCCCTCGTGACGCCGACGGTCATGGAACCCACACAGCCTCCACCGCCGCTGGTCGTTACGCTTTCCAAGCAAACATGTCCGGTTACGCTTCTGGGATTGCCAAAGGTGTTGCTCCGAAAGCACGGTTAGCGGTTTACAAAGTTTGCTGGAAGAACTCCGGTTGCTTCGATTCGGATATCCTCGCTGCTTTCGACGCAGCAGTTAACGACGGTGTTGATGTAATTTCTATATCAATCGGTGGCGGAGACGGTATAGCCTCACCCTACTATCTCGACCCGATAGCAATCGGATCTTACGGCGCCGTTTCCAGAGGTGTGTTCGTTTCATCCTCCGCCGGAAACGACGGTCCAAGTGGAATGTCAGTGACAAACCTTGCTCCATGGTTGACGACGGTAGGAGCAGGCACCATCGATCGTGATTTCCCAGCACAGATTACCCTCGGCGACGGGAGAAAATTCTCCGGCGTTTCACTATACTCCGGAGCAGCTTTACAAGGTAAAATGTATCAACTAGTGTATCCTGGAAAATCAGGGATTTTAGGTGATTCACTCTGCATGGAAAATTCACTGGATCCGAAACAAATAACTGGAAAAATTGTGGTGTGTGATAGAGGAAGTAGTCCTAGAGTTGCAAAAGGGCTTGTTGTGAAGAAAGCCGGTGGTGTTGGAATGATTCTCGCTAACGGAATCTCAAACGGCGAAGGACTCGTCGGAGATGCTCATCTTCTTCCTGCATGTGCTATTGGTTCCAACGAAGGAGATATAATCAAAGCCTATATCTCTTCATCTGCTAATCCAACGGCCACGATTGATTTCAAAGGAACTATCCTCGGAATCAAACCGGCTCCGGTTCTAGCTTCATTTTCAGCGAGAGGACCCAATGGTTTGAACCCTCAGTTACTCAAACCGGATTTGATTGCTCCCGGAGTTAACATCCTCGCCGCTTGGTCTGACGCTGTGGGTCCAACCGGTCTTGATTCCGATACTCGTAGAACCGAGTTCAATATTTTGTCTGGAACATCAATGGCTGCACCACACGTGAGCGGTGCTGCGGCGTTGCTAAAATCTGCTCATCCAGATTGGAGTCCCGCCGCCGTGAGATCCGCCATGATGACCACCGCTTCTGTTTTGGATAACCGGAACCTCCCTATGTTGGATGAGGCTACAGGGAATAATTCCACTCCTTATGATTTCGGGTCGGGGCATCTCAATTTGGGTAACGCGATGGATCCTGGATTGATCTACGATATTACAAACACTGATTACGTTAATTTCCTCTGCGCTATTGGTTACGAACCAAAGGTTATTCAGGTAATTACTCGCGTGCCGGAGAATTGTCCCGCGAAGAAGCCTTTGCCGGAGAATCTGAATTACCCGTCGTTCGTGGCTATGTTTCCGGTGGCTTCAAGGAAATTGGCTTCCAAGATGTTTATAAGGACTGTTACTAATGTGGGAGCGGTGAATTCGGTTTACCACGTGAGTGTGGAGTCGCAGATTAAGGGGGTTACGGTGACGGTGAAGCCGTCACGGCTTGTGTTCTCGGAGGCTGTGAAGAAGAGGAGTTACGTAGTGACGGTAACGGCGGACACCCGAAATTTGAAACTGGATCCTTCTGGAGCGGTTTTTGGGTCGCTTTCGTGGACGGATGGTAAACATGTTGTTCGGAGCCCCATTGTGGTTACTCAAATAGAACCGTTATAG 2343 0.4797 MGEILNSIPLPLVFSIFFLFFFSLSSTHVLSAENELPKTFIFRVNSYSKPSIFPTHYHWYTAEFTEQTHILHVYDTVFHGFSAVLTRQQAASVGNHPSILAVFEDRRRQLHTTRSPQFLGLRNQRGLWSESDYGSDVIVGVFDTGIWPERRSFSDVNLGPIPRRWKGICESGEKFSPRNCNKKLIGARFFSKGHEAGSGFSGPLNPINETVEFRSPRDADGHGTHTASTAAGRYAFQANMSGYASGIAKGVAPKARLAVYKVCWKNSGCFDSDILAAFDAAVNDGVDVISISIGGGDGIASPYYLDPIAIGSYGAVSRGVFVSSSAGNDGPSGMSVTNLAPWLTTVGAGTIDRDFPAQITLGDGRKFSGVSLYSGAALQGKMYQLVYPGKSGILGDSLCMENSLDPKQITGKIVVCDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACAIGSNEGDIIKAYISSSANPTATIDFKGTILGIKPAPVLASFSARGPNGLNPQLLKPDLIAPGVNILAAWSDAVGPTGLDSDTRRTEFNILSGTSMAAPHVSGAAALLKSAHPDWSPAAVRSAMMTTASVLDNRNLPMLDEATGNNSTPYDFGSGHLNLGNAMDPGLIYDITNTDYVNFLCAIGYEPKVIQVITRVPENCPAKKPLPENLNYPSFVAMFPVASRKLASKMFIRTVTNVGAVNSVYHVSVESQIKGVTVTVKPSRLVFSEAVKKRSYVVTVTADTRNLKLDPSGAVFGSLSWTDGKHVVRSPIVVTQIEPL 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02955 780 SUPERFAMILY PA domain 384 476 IPR046450 -
Vivi5g02955 780 Pfam PA domain 384 469 IPR003137 -
Vivi5g02955 780 Gene3D - 352 491 - -
Vivi5g02955 780 Gene3D - 640 777 - -
Vivi5g02955 780 FunFam Subtilisin-like protease SBT1.5 640 777 - -
Vivi5g02955 780 Gene3D Peptidase S8/S53 domain 136 636 IPR036852 GO:0004252|GO:0006508
Vivi5g02955 780 ProSitePatterns Serine proteases, subtilase family, serine active site. 553 563 IPR023828 -
Vivi5g02955 780 CDD PA_subtilisin_like 359 484 - -
Vivi5g02955 780 FunFam subtilisin-like protease SBT1.5 352 491 - -
Vivi5g02955 780 CDD Peptidases_S8_3 109 589 IPR034197 -
Vivi5g02955 780 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 67 774 IPR045051 -
Vivi5g02955 780 Pfam Fibronectin type-III domain 669 774 IPR041469 -
Vivi5g02955 780 Pfam Subtilase family 134 603 IPR000209 GO:0006508|GO:0008236
Vivi5g02955 780 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Vivi5g02955 780 PRINTS Subtilisin serine protease family (S8) signature 218 231 IPR015500 -
Vivi5g02955 780 PRINTS Subtilisin serine protease family (S8) signature 552 568 IPR015500 -
Vivi5g02955 780 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 111 IPR037045 -
Vivi5g02955 780 FunFam Subtilisin-like protease SBT1.5 136 365 - -
Vivi5g02955 780 Pfam Peptidase inhibitor I9 65 111 IPR010259 -
Vivi5g02955 780 SUPERFAMILY Subtilisin-like 110 627 IPR036852 GO:0004252|GO:0006508
Vivi5g02955 780 ProSiteProfiles Serine proteases, subtilase domain profile. 109 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02955 Vivi-Chr5 117694768 117697574 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02955 15 780 Subtilisin-like Serine Gene Family AT4G34980 73.307 0.0 1176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02955 - - gmx:100817537 1319.29