Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02923 ATGGGTTTTCTTCTGCTTCTGAAGATAATTCAACATGCAAAGCAAAAGTTACGACTACGATCTCAACGGTGCTCAAAGCGCCATTTTTCAGGACAGGTTTGGAAGAAAATAGTTGATGTTCCAAGAGGACATTTTGCTGTGTATGTAGGTGATAAGGATGATGAATATATGAGGCGGTTTGTGGTCCCTATATCTTACTTGAAGCAACCTATGTTTCAGGCCTTGTTGAGTCTTGCTGAGGAAGAGTTTGGTTTTGAACACCCAATGGGAAACATTGTTATTCCATGCCCTATTCGTTATTTTGTTACTCTCATTTCTTGTTTCAATGGCTCGTAA 336 0.3958 MGFLLLLKIIQHAKQKLRLRSQRCSKRHFSGQVWKKIVDVPRGHFAVYVGDKDDEYMRRFVVPISYLKQPMFQALLSLAEEEFGFEHPMGNIVIPCPIRYFVTLISCFNGS 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02923 111 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 37 107 IPR003676 GO:0009733
Vivi5g02923 111 Pfam Auxin responsive protein 22 107 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02923 Vivi-Chr5 117217394 117217838 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02923 39 111 Calmodulin-binding Proteins AT5G20810 45.205 9.35e-17 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02923 K14488 - cam:101505472 145.206