Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02922 ATGAAGACAACAAGTAACAGATTTGTGGGAATTGTTCAAGCTAAACAGAAGCTTCAAAGAACACTTTCACAAAGAATTAGAATGGCTTCAGCTGTTGGTGATGTACCAAAAGGACACTTGGCAGTTTATGTTGGAAATGACCATAAGAGGTTTGTGATTCCAATATCATTTTTGAGTCATCCTTTGTTTAGAGACTTGTTGGATTGGGCTGAAGAAGAATTCGGATTTAATCATCCGATGGGCGGTCTCACGATTCCTTGCACCGAAGATTACTTCATTAGTCTAACTTCTTCTCTTAATTAG 303 0.3795 MKTTSNRFVGIVQAKQKLQRTLSQRIRMASAVGDVPKGHLAVYVGNDHKRFVIPISFLSHPLFRDLLDWAEEEFGFNHPMGGLTIPCTEDYFISLTSSLN 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02922 100 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 25 99 IPR003676 GO:0009733
Vivi5g02922 100 Pfam Auxin responsive protein 23 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02922 Vivi-Chr5 117187255 117187915 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02922 34 92 Calmodulin-binding Proteins AT3G43120 62.712 8.72e-21 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02922 K14488 - gmx:100781277 186.422