Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02921 ATGGGTTTCCGCAGTATTATTAGAAGAAGATCATTTTCCAAAACCCAAGGATCTACCAAAGGATTTGAAGTCCCTAAAGGCTATCTTGCGGTCTATGTTGGAGATAAAATGAGGCGGTTTGTGATTCCGGTATCATACTTGAACCAACCATTGTTTCAAGAATTATTAAATCAAGCAGAAGAAGAATTTGGATATGATCATCCCATGGGTGGTCTCACAATTCCATGCAGTGAAGATAAATTCCTAAATCTCACTTCTCGCTTGAGCGAATTGTAG 276 0.3877 MGFRSIIRRRSFSKTQGSTKGFEVPKGYLAVYVGDKMRRFVIPVSYLNQPLFQELLNQAEEEFGYDHPMGGLTIPCSEDKFLNLTSRLSEL 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02921 91 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 15 88 IPR003676 GO:0009733
Vivi5g02921 91 Pfam Auxin responsive protein 10 87 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02921 Vivi-Chr5 117089696 117090474 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02921 23 81 Calmodulin-binding Proteins AT3G43120 59.322 1.42e-20 78.6