Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02917 ATGGGTTTTCATTTACTTGGTATCATCAAAAGCGAATCATTTTCTACAAAACGAGGAGTTTCAAAAGGCGTGGACGTGCCAAAAGGATATCTAGCAGTATATGTTGGAGAGAAACAGACGCGGTATATGATTCCTGTACCATACTTGAATCAACCATTGTTTCAAGACTTGTTGAGTCAAGCCGAGGAAGAGTTTGGATACAATCATCCGATGGGTGGTCTCACCATTCCATGCACAGAAGATGTATTCCAACATGTTACTTCTACCTTGAATGGGCTGTAA 282 0.4078 MGFHLLGIIKSESFSTKRGVSKGVDVPKGYLAVYVGEKQTRYMIPVPYLNQPLFQDLLSQAEEEFGYNHPMGGLTIPCTEDVFQHVTSTLNGL 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02917 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 23 90 IPR003676 GO:0009733
Vivi5g02917 93 Pfam Auxin responsive protein 18 90 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02917 Vivi-Chr5 117052914 117053425 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02917 6 92 Calmodulin-binding Proteins AT3G43120 41.379 4.71e-18 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02917 K14488 - gmx:100789280 139.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g02917 5 117052914 117053425 Vivi5g02917 5 117052914 117053425 ECH