Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02916 ATGGCATTTCGTTTGCCTTTGATAATGCAAGCTAAGAAGCATATCCTCTTCCGCGCACTTTCAAGAGGTAAAAAAGTGTTGTCAGGTAACAGTAATATACCAAAAGGTTATTTAGCAGTTTATGTTGGAGAAGAGAAAAAGAAGAGATTTGTGGTTCCGATGTCATATTTACATCAACCTGCTTTTCAACAGTTTCTTTGTAAAGCGGAAGAAGAGTTCGGATTTAACCATCCAATGGGAGGTCTCACCATTCCTTGCAGAGAAGAGATCTTTGTTAATGTAACTTCTCAATTGGAAAGTTAA 303 0.3729 MAFRLPLIMQAKKHILFRALSRGKKVLSGNSNIPKGYLAVYVGEEKKKRFVVPMSYLHQPAFQQFLCKAEEEFGFNHPMGGLTIPCREEIFVNVTSQLES 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02916 100 Pfam Auxin responsive protein 27 96 IPR003676 GO:0009733
Vivi5g02916 100 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 28 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02916 Vivi-Chr5 117052084 117052731 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02916 32 91 Calmodulin-binding Proteins AT3G43120 55.000 1.60e-16 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02916 K14488 - aew:130774660 134.035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g02916 5 117052084 117052731 Vivi5g02916 5 117052084 117052731 ECH