Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02894 ATGGGTTTTCGTTTTCCTAGTATGATCAAAAGAGCATCCTCTTCAAAAGCTATGGGCATGCCGAAAGGATATGTTGCTGTGTATGTTGGAGAGAAACAAAAGAGATTTGTGATCCCTATATCATACTTGAACCAACCGTCGTTTCAAGACTTGCTGAGTCAAGCCGAGGAAGAGTTTGGATACGATCATCCGATGGGGGGCCTCACAATTCCTTGCGCAGAAGATGTCTTCCAAAATATAACTTCTGGCTTGAACGGCCTATGA 264 0.4356 MGFRFPSMIKRASSSKAMGMPKGYVAVYVGEKQKRFVIPISYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCAEDVFQNITSGLNGL 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02894 87 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 8 83 IPR003676 GO:0009733
Vivi5g02894 87 Pfam Auxin responsive protein 12 82 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02894 Vivi-Chr5 116823178 116824167 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02894 20 78 Calmodulin-binding Proteins AT3G43120 52.542 2.25e-17 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02894 K14488 - gmx:100787155 141.739