Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi5g02893 | ATGGGTTTCGGCATAACAAGTATTATCAGAAGGGCATCATTTTCCAGAACCCAAGGATCTACCAAGGGAATTGAAGTTCCTAAAGGCTATCTCGCCGTCTATGTTGGAGACAAAATGAGGAAGTTTACGATTCCGGTATCATACTTGAACCAACCATTATTTCAAGAATTATTAAATCAAGCAGAAGAAGAATTCGGATATGATCATCCAATGGGTGGTCTCACAATTCCTCAGTATATATTTCTCATCCACTCCTTTAACATAAAAGAAACAATGGGTTTCCGCAGTATTATCAGAAAAACATCATTTTCCAAAACCCAAGGATCTACCAAAGGACTTGAAGTCCCTAAGGGCTACCTCGCAGTCTATGTTGGAGATAAAATGAAGCGGTTTGTGATTCCGGTATCATACTTGAACCAATCATTGTTTCAAGAATTGTTAAATGAAGCAGAAGAAGAATTTGGATATGATCATCCAATGGGTGGTCTCACAATTCCATGCAGTGAGGATGAATTCTTAAGCCTCACGTCTCGCTTGAATTGA | 543 | 0.3886 | MGFGITSIIRRASFSRTQGSTKGIEVPKGYLAVYVGDKMRKFTIPVSYLNQPLFQELLNQAEEEFGYDHPMGGLTIPQYIFLIHSFNIKETMGFRSIIRKTSFSKTQGSTKGLEVPKGYLAVYVGDKMKRFVIPVSYLNQSLFQELLNEAEEEFGYDHPMGGLTIPCSEDEFLSLTSRLN | 180 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi5g02893 | 180 | Pfam | Auxin responsive protein | 12 | 77 | IPR003676 | GO:0009733 | |
Vivi5g02893 | 180 | Pfam | Auxin responsive protein | 101 | 178 | IPR003676 | GO:0009733 | |
Vivi5g02893 | 180 | PANTHER | SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED | 106 | 179 | IPR003676 | GO:0009733 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi5g02893 | Vivi-Chr5 | 116822128 | 116825593 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi5g02893 | 25 | 77 | Calmodulin-binding Proteins | AT3G43120 | 60.377 | 2.61e-16 | 70.9 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vivi5g02893 | 5 | 116822128 | 116825593 | Vivi5g02893 | 5 | 116822128 | 116825593 | ECH |