Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02891 ATGGCCATTAAGAAATACTCCAACAAACTTCCTCAACATGCAGTGTTGAAACAAATCCTCAAAAGATGTTCTAGCTTAGGTAAGAAAAACGACTATGACGATAATGAATACCCCATTGATGTACCAAAAGGTCATTTCCCTGTTTACGTTGGTGAAAACCGAAGTAGATATATTGTTCCTATCTCTTTCTTAACTCACCCTGAGTTTCAGTCTCTTCTTCGTCAAGCTGAAGAAGAATTCGGATTTGATCATGATATGGGTCTTACCATTCCTTGTCAAGAAGTTGTTTTTCAGTCACTAACATCCATGATAAGATGA 318 0.3711 MAIKKYSNKLPQHAVLKQILKRCSSLGKKNDYDDNEYPIDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLRQAEEEFGFDHDMGLTIPCQEVVFQSLTSMIR 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02891 105 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 38 103 IPR003676 GO:0009733
Vivi5g02891 105 Pfam Auxin responsive protein 31 104 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02891 Vivi-Chr5 116769935 116770819 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02891 20 105 Calmodulin-binding Proteins AT3G43120 46.512 2.25e-20 78.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g02891 5 116769935 116770819 Vivi5g02891 5 116769935 116770819 ECH