Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02886 ATGGCCGCACCTCAAACCGTCTCTTCCTCCCTCTCCAAACCCTCCCCTCTCTCCCCCCCTCTCAACCACACCCGTTTCTTCCCTAAACCCACTCTCCCCTGCATCCCCAACAACACCCCAAAACCCCTTTTCACACTCTCCTCCAAAAACCCACTTTCCGACATCATCATCTCACACAAAAACCAAACATCCCCACAAGACAACGATGTCTTCATCGAAGACGACAAGCCTCGTGAAGAGTGCGGCGTTGTCGGCATATACGGCGACTCAGAAGCTTCCCGTCTCTGTTACTTAGCCCTACATGCTCTCCAACACCGTGGCCAAGAAGGCGCCGGAATCGTCACCGTCAACAACAACATCCTCCAATCCATCACCGGCGTTGGCCTTGTCTCCGATGTCTTCAACGAATCTAAGCTCGATCAGTTACCCGGAAGCCTAGCTATTGGCCATGTTCGTTATTCCACTGCTGGACAATCCATGCTGAAAAATGTTCAACCTTTTGTTGCTGGGTACCGTTTTGGTTCTGTTGGGGTTGCTCATAACGGTAATTTGGTTAACTATCGCACTCTGAGAGCTAAGCTTGAAGAAAAAGGTTCAATTTTTAACACTACTTCTGATACTGAAGTTGTTCTTCATTTGATTGCTACTTCAAAGCATAGACCTTTTATTTTGAGAATTGTTGATGCATGTGAGAAGCTTGAAGGGGCTTATTCTATTGTGTTTGTTACTGAGGATAAGCTTGTTGCTGTGAGAGATCCTTTCGGGTTTCGGCCTTTGGTTATGGGGAGAAGAAGTAATGGTGCTGTTGTTTTTGCTTCTGAGACTTGTGCTCTTGATTTGATTGAGGCTACTTATGAGAGGGAAGTGTTCCCTGGTGAGGTTGTTGTGGTTGACGATAACGGGATTCAGTCGCTCTGTCTGATGTCTCATCCGCAGCCGAAGCAATGTATTTTCGAGCATATTTACTTTGCTTTGCCTAATTCTGTTGTTTTTGGTAGGTCTGTGTATGAGTCGCGGAGACGATTCGGTGAGGTACTTGCTACTGAGAGTCCTGTTGATTGTGATGTTGTGATAGCGGTGCCTGATTCTGGTGTTGTTGCTGCACTTGGTTATGCTGAAAAAGCCGGTGTTCCTTTTCAACAAGGGTTGATTAGGTCACACTATGTAGGAAGGACTTTCATTGAGCCGTCTCAGAAAATTAGGGATTTCGGTGTGAAATTGAAGCTCTCGCCGGTTCGTGCTGTGCTTGAAGGTAAAAGGGTTGTTGTTGTTGATGATTCAATTGTGAGGGGAACAACATCCTCAAAGATTGTGAGGTTGCTTAAAGAAGCAGGTGCAAAAGAAGTTCACATGAGAATCGCATGTCCACCGATTATCGGTTCTTGTTATTACGGAGTCGATACACCTAGCTCCGAGGAGTTGATATCTAACCGGATGAGTGTTGAAGAAATAAGGGATTTTATCGGATCAGATTCACTCGCTTTTCTTCCAATGAATAGCTTGCATACCATGTTGGGGAATAACTCTCCTAATTTCTGTTATGCTTGTTTCTCTGGAAAATACCCTGTTGAACCACGAGAGCTCAAGGTTAAACGGGTCGGTGACTTTGTCGATGATGGTTTGAATGGAAGTTTGGAACAAATTGACGGCGGTTGGGTTCAAGCTAACCGAAATCCAAAAGAGGTGAAAGCTTCTACTGGTGCTTGA 1707 0.4558 MAAPQTVSSSLSKPSPLSPPLNHTRFFPKPTLPCIPNNTPKPLFTLSSKNPLSDIIISHKNQTSPQDNDVFIEDDKPREECGVVGIYGDSEASRLCYLALHALQHRGQEGAGIVTVNNNILQSITGVGLVSDVFNESKLDQLPGSLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRTLRAKLEEKGSIFNTTSDTEVVLHLIATSKHRPFILRIVDACEKLEGAYSIVFVTEDKLVAVRDPFGFRPLVMGRRSNGAVVFASETCALDLIEATYEREVFPGEVVVVDDNGIQSLCLMSHPQPKQCIFEHIYFALPNSVVFGRSVYESRRRFGEVLATESPVDCDVVIAVPDSGVVAALGYAEKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIACPPIIGSCYYGVDTPSSEELISNRMSVEEIRDFIGSDSLAFLPMNSLHTMLGNNSPNFCYACFSGKYPVEPRELKVKRVGDFVDDGLNGSLEQIDGGWVQANRNPKEVKASTGA 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02886 568 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 79 528 - -
Vivi5g02886 568 CDD GPATase_N 81 331 IPR035584 -
Vivi5g02886 568 Pfam Glutamine amidotransferase domain 159 278 IPR017932 -
Vivi5g02886 568 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 81 522 IPR029055 -
Vivi5g02886 568 MobiDBLite consensus disorder prediction 1 19 - -
Vivi5g02886 568 Hamap Amidophosphoribosyltransferase [purF]. 80 521 IPR005854 GO:0004044|GO:0009113
Vivi5g02886 568 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 81 300 IPR017932 -
Vivi5g02886 568 Gene3D - 340 504 IPR029057 -
Vivi5g02886 568 SUPERFAMILY PRTase-like 316 527 IPR029057 -
Vivi5g02886 568 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 81 304 IPR029055 -
Vivi5g02886 568 CDD PRTases_typeI 343 454 IPR000836 -
Vivi5g02886 568 MobiDBLite consensus disorder prediction 1 23 - -
Vivi5g02886 568 NCBIfam amidophosphoribosyltransferase 81 522 IPR005854 GO:0004044|GO:0009113
Vivi5g02886 568 Pfam Phosphoribosyl transferase domain 355 451 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02886 Vivi-Chr5 116638530 116640578 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02886 67 554 PRT Gene Family AT4G34740 84.049 0.0 842
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02886 K00764 - gmx:100801720 945.266