Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g02883 ATGGAACAGTTAAGTATACCTCAGTTTAATCAATCACAAATGAGAAATCAGAATCATAATCAGCAGGTTCAACAGCAGGTTCATCAACAGCATCATCATTTTCAAGATGGAAGTAACAAGAGAGTGGGTATACCACCGTCTCACCCGCACCAGATCCCGCCTATTTCGCCCTACTCTCAGATCCCGGTTTCGCGGCCGATAATGCCTCCCCATAACACTAGTCCTACACCTTCACACACTCGATCACTCTCTCAGCCGTCGTTTTTCTCTCTCGATTCTCTTCCGCCTCTTAGTCCTTGTCCGTTTCGGGATTCTTCGTCCACGTCGCACTCGGAACATGCTGACGTGTCTATGGAAGATCGTGACGTCAGCTTACCGCCGTTTGCTAGAAACCCTTCCTTGCCGCCGCGGAAATCGCACCGGCGGTCTAATAGTGATATTCCGTTTGGGTTTTCTACTGTTTTGCAGTCTTCGCCGCCGTTGATTCCTCTCAGGGGAAGAGAAATGGCGAAACCTAATCAGTTAGCGGTGAAAAGAGAAACAGGTTGGGAGAGAAATGTTGATAGTAGTAATAACAATGTAGAGGAGAAGAAATCGTTATCTCCGGAAGGTGAAGTTGTGGATGATCTTTTCTCTGCTTATATGAATTTGGATAACATCGATGCAATTAACTCGACCGGGAACGATGACAAGAATGCGAACGCGGCTGTTAATGATAATCGTGATGATTTGGATAGTAGAGCGAGTGGAACGAAGACGAATGGCGGTGATAGTAGTGATAATGAAGCTGAGAGTAGTGTGAATGAGAGTGGGGATAGTATGCAGAGGAGGGAAGGGATGAAGAGGAGTGCTGGAGGTGATATTGCACCTACTACACGACACTATAGGAGCGTGTCGATGGATAGTTTCATTGGGAAGTTGAATTTCAATGATGAGTCTTCGAAGCTTCCGCCTTCACCGGGTGGATTGGTGTCTCCGGGTAATTCGGGGGATGGGAATGCGGCGGCTTTTAGCTTGGAGTTTGGGAATGGGGAGTTCAGTGGGCCTGAGTTGAAGAAAATTATGGCGAATGAAAAGCTTGCTGAGATTGCGATGGCTGATCCGAAGCGTGCTAAGAGGATTTTGGCTAATAGGCAATCGGCTGCGCGTTCGAAAGAACGCAAGATGCGATACATTTCAGAGCTAGAACACAAGGTTCAGACTCTGCAGACTGAAGCCACCACACTCTCTGCACAACTTACTTTGTTGCAGAGAGATTCTGTTGGACTTACTAACCAGAATAGCGAGTTAAAGTTCCGTCTTCAATCCATGGAACAACAGGCAAAACTCCGAGATGCTCTGAATGAGGCCCTTACCGCCGAGGTTCAAAGACTGAAGATTGCTACAGCTGAGTTGAATGGGGAGACACATCCTTCTAACTGCATGATCCCACAACATTCTGTCAACCCTATGATGTTTCAACAACAGCATCGGCCTCCTACATCCCAACAAAACATTCATATTCAACAGCAGCAACAACATCAGCAGCAGAATGGTAATGCCAACTCAAAAAACGACTTAAATCAATAG 1569 0.4653 MEQLSIPQFNQSQMRNQNHNQQVQQQVHQQHHHFQDGSNKRVGIPPSHPHQIPPISPYSQIPVSRPIMPPHNTSPTPSHTRSLSQPSFFSLDSLPPLSPCPFRDSSSTSHSEHADVSMEDRDVSLPPFARNPSLPPRKSHRRSNSDIPFGFSTVLQSSPPLIPLRGREMAKPNQLAVKRETGWERNVDSSNNNVEEKKSLSPEGEVVDDLFSAYMNLDNIDAINSTGNDDKNANAAVNDNRDDLDSRASGTKTNGGDSSDNEAESSVNESGDSMQRREGMKRSAGGDIAPTTRHYRSVSMDSFIGKLNFNDESSKLPPSPGGLVSPGNSGDGNAAAFSLEFGNGEFSGPELKKIMANEKLAEIAMADPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQNSELKFRLQSMEQQAKLRDALNEALTAEVQRLKIATAELNGETHPSNCMIPQHSVNPMMFQQQHRPPTSQQNIHIQQQQQHQQQNGNANSKNDLNQ 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g02883 522 MobiDBLite consensus disorder prediction 224 293 - -
Vivi5g02883 522 MobiDBLite consensus disorder prediction 179 203 - -
Vivi5g02883 522 Pfam bZIP transcription factor 369 423 IPR004827 GO:0003700|GO:0006355
Vivi5g02883 522 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 367 430 IPR004827 GO:0003700|GO:0006355
Vivi5g02883 522 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 79 517 - -
Vivi5g02883 522 MobiDBLite consensus disorder prediction 1 32 - -
Vivi5g02883 522 Coils Coil 385 419 - -
Vivi5g02883 522 MobiDBLite consensus disorder prediction 47 73 - -
Vivi5g02883 522 MobiDBLite consensus disorder prediction 249 273 - -
Vivi5g02883 522 MobiDBLite consensus disorder prediction 486 522 - -
Vivi5g02883 522 MobiDBLite consensus disorder prediction 74 92 - -
Vivi5g02883 522 SUPERFAMILY Leucine zipper domain 369 420 IPR046347 GO:0003700|GO:0006355
Vivi5g02883 522 FunFam probable transcription factor PosF21 368 421 - -
Vivi5g02883 522 Coils Coil 448 468 - -
Vivi5g02883 522 CDD bZIP_plant_RF2 370 419 IPR044759 GO:0003700|GO:0006355
Vivi5g02883 522 SMART brlzneu 365 429 IPR004827 GO:0003700|GO:0006355
Vivi5g02883 522 MobiDBLite consensus disorder prediction 1 158 - -
Vivi5g02883 522 Gene3D - 368 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g02883 Vivi-Chr5 116591824 116594843 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g02883 34 488 bZIP Transcription Factor Family AT4G38900 59.879 7.79e-164 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi5g02883 bZIP_1 6.7e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g02883 - - tpra:123913993 719.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g02883 5 116591824 116594843 Vivi5g02883 5 116591824 116594843 ECH